Table 3.
SNP | Source | Gene/Nearest Gene | MAF | CHR | Position | p-value | β±SE |
---|---|---|---|---|---|---|---|
rs1035798 | GWAS | AGER | 0.235 | 6 | 32,151,222 | 0.0073 | −0.089±0.033 |
rs7198427 | GWAS | MT1A | 0.086 | 16 | 56,685,080 | 0.0099 | 0.130±0.049 |
rs6499850 | GWAS | MT1A | 0.095 | 16 | 56,687,638 | 0.014 | −0.120±0.048 |
rs204995 | Exome | AGER | 0.291 | 6 | 32,154,285 | 0.022 | 0.076±0.033 |
rs7197489 | GWAS | MT1A | 0.181 | 16 | 56,683,993 | 0.031 | −0.077±0.036 |
rs204993 | Exome | AGER | 0.001 | 6 | 32,155,581 | 0.045 | 0.064±0.032 |
rs113092523 | Exome | DDOST | 0.001 | 1 | 20,971,057 | 0.045 | 0.850±0.420 |
rs3130284 | Exome | AGER | 0.003 | 6 | 32,140,487 | 0.047 | 0.067±0.035 |
rs10503574 | GWAS | MSR1 | 0.036 | 8 | 15,984,590 | 0.052 | −0.151±0.077 |
rs1871574 | GWAS | MSR1 | 0.018 | 8 | 15,975,574 | 0.053 | 0.209±0.108 |
rs17426435 | Exome | PRKCSH | 0.061 | 19 | 11,546,269 | 0.054 | 0.110±0.056 |
rs3134946 | Exome | AGER | 0.209 | 6 | 32,145,993 | 0.054 | 0.067±0.035 |
rs3134947 | Exome | AGER | 0.001 | 6 | 32,145,205 | 0.054 | 0.067±0.035 |
rs3096697 | Exome | AGER | 0.197 | 6 | 32,134,510 | 0.054 | 0.067±0.035 |
rs204992 | Exome | AGER | 0.002 | 6 | 32,156,908 | 0.062 | 0.063±0.034 |
rs176095 | Exome | AGER | 0.001 | 6 | 32,158,319 | 0.070 | 0.061±0.034 |
rs414836 | GWAS | MSR1 | 0.065 | 8 | 16,045,585 | 0.087 | −0.096±0.056 |
rs204994 | Exome | AGER | 0.255 | 6 | 32,154,998 | 0.093 | 0.057±0.034 |
rs17677443 | GWAS | MSR1 | 0.060 | 8 | 16,029,070 | 0.094 | 0.099±0.059 |
rs11786960 | GWAS | MSR1 | 0.461 | 8 | 16,010,949 | 0.096 | −0.046±0.027 |
rs142241539 | Exome | AGER | 0.001 | 6 | 32,130,655 | 0.10 | −0.690±0.420 |
rs3130349 | Exome | AGER | 0.184 | 6 | 32,147,696 | 0.12 | 0.059±0.038 |
rs448578 | GWAS | MSR1 | 0.066 | 8 | 16,042,900 | 0.13 | 0.085±0.056 |
rs6530943 | GWAS | MSR1 | 0.090 | 8 | 15,973,590 | 0.14 | −0.074±0.050 |
rs10103856 | GWAS | MSR1 | 0.065 | 8 | 16,048,551 | 0.16 | −0.079±0.056 |
rs640742 | GWAS | DDOST | 0.412 | 1 | 20,984,554 | 0.17 | 0.041±0.029 |
rs501257 | Exome | PRKCSH | 0.140 | 19 | 11,536,575 | 0.17 | 0.055±0.040 |
rs149461273 | Exome | AGER | 0.001 | 6 | 32,155,917 | 0.18 | 0.560±0.420 |
rs111334879 | Exome | DDOST | 0.001 | 1 | 20,981,976 | 0.20 | −0.360±0.280 |
rs204989 | GWAS | AGER | 0.222 | 6 | 32,161,852 | 0.20 | 0.045±−0.035 |
rs204990 | GWAS | AGER | 0.222 | 6 | 32,161,430 | 0.20 | 0.045±0.035 |
rs204991 | Exome | AGER | 0.225 | 6 | 32,161,366 | 0.20 | 0.044±0.035 |
rs11125 | Exome | LGALS3 | 0.098 | 14 | 55,611,839 | 0.22 | −0.059±0.048 |
Results listed only for associations with a p-value ≤0.25, MAF: Minor Allele Frequency, CHR: Chromosome, SE: Standard Error.