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. 2016 Apr 11;17:159. doi: 10.1186/s12859-016-0997-6

Table 3.

Arabidopsis thaliana data [7]: Method comparison for estimating the Δ Δ C q-value

Estimate se t-value df p-value LCL UCL
MT7 vs Tublin
EC -4.374 0.4319 -10.13 4 5.353·10−4 -5.573 -3.174
EC&VA1 -4.374 3.788 -1.155 4 3.126·10−1 -14.89 6.144
MT7 vs UBQ
EC -3.381 0.137 -24.67 4 1.601·10−5 -3.761 -3
EC&VA1 -3.381 1.351 -2.503 4 6.658·10−2 -7.132 0.3699

EC efficiency corrected LMM estimate ignoring the uncertainty of the efficiency estimates. EC&VA1 EC and variance adjusted LMM estimate using the delta method. The last two columns show the 952000 lower and upper confidence interval limits