Table 2.
EcoRI Digest (isoschizomer) lane∗ |
Methylation pattern in | Subtype of methylation | ||||
---|---|---|---|---|---|---|
HpaII | MspI | HpaII | MspI | B. napus | Addition Lines | |
– | – | –▾ | +▴ | #CCGG GGCC | CCGG GGCC | B3 |
– | – | + | – | CCGG GGCC | CCGG GGCC | B4 |
– | + | + | + | CCGG GGCC | CCGG GGCC | B1 |
+ | – | + | + | CCGG GGCC | CCGG GGCC | B2 |
+ | + | – | + | CCGG GGCC | CCGG GGCC | A2 |
+ | + | + | – | CCGG GGCC | CCGG GGCC | A1 |
– | + | – | – | CCGG GGCC | CCGG GGCC | A3 |
+ | – | – | – | CCGG GGCC | CCGG GGCC | A4 |
– | + | + | – | CCGG GGCC | CCGG GGCC | C1 |
+ | – | – | + | CCGG GGCC | CCGG GGCC | C2 |
+ | + | + | + | CCGG GGCC | CCGG GGCC | D1 |
+ | – | + | – | CCGG GGCC | CCGG GGCC | D2 |
– | + | – | + | CCGG GGCC | CCGG GGCC | D3 |
#The combination of four letter represents the specific restriction endonuclease sequence and the underscored letter represent the restriction endonuclease digestion site. ▴Represented presence (+) of a band resulted from the EcoRI/HpaII-digested∗ or EcoRI/MspI-digested∗ genomic DNA of parental B. napus and nine additions. ▾ Represented absence (-) of a band resulted from the EcoRI/HpaII-digested∗ or EcoRI/MspI -digested∗ genomic DNA of parental B. napus and nine additions. ++,+-, -+ and -- represented CCGG/GGCC or C5mCGG/GGCC, 5mCCGG/GGCC, C5mCGG/GGC5mC and 5mCCGG/GGCC5m, respectively.