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. 2016 Apr 12;7:475. doi: 10.3389/fpls.2016.00475

FIGURE 3.

FIGURE 3

Nucleotide sequence alignments of CABs (A) and their associated DNA-satellites (B,C). All the sequences were retrieved from NCBI GenBank database and aligned using ClustalW in Mega6. The isolate descriptors and accession numbers are given on the left side of each alignment. All the possible sgRNAs are summarized in the Supplementary Table S1. Only the recommended sgRNA sequence is given at the top of each alignment as black text. The protospacer adjacent motif (PAM) sequence is indicated in red text. Any mismatch outside of the seed sequence is highlighted as white text with black background.