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. 2016 Apr 13;6:24342. doi: 10.1038/srep24342

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Copyright © 2016, Macmillan Publishers Limited

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Each gene of Clade 2 is compared against its ortholog in Clade 1 and Clade 3. The strains XH386, TYTH-1 and NCGM_237 represent Clade 1, Clade 2 and Clade 3, respectively. Gene order is referred to according to the genome of TYTH-1. Genes in red represent those for which Clade 2 is closer to Clade 1 than Clade 3; genes in green represent those for which Clade 2 is closer to Clade 3 than Clade 1; genes in yellow represent those for which Clade 2 has equal distance to Clade 1 and Clade 3. The positions of seven housekeeping genes used by MLST-OD scheme are marked.