Table 2. Nucleotide polymorphic sites and cpDNA haplotypes in cacao populations based on variation in the intergenic trnH-psbA spacer region.
| Haplotype | Polymorphic site | Populations (see Table 1 note) | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22 | 134 | 206 | 309 | 310 | 487 | Pop1 | Pop2 | Pop3 | Pop4 | Pop5 | Pop6 | Pop7 | Pop8 | Pop9 | |
| H1 | – | T | – | A | A | A | 3 | 2 | 3 | 2 | 5 | 1 | 3 | ||
| H2 | C | T | – | A | A | A | 1 | 1 | 2 | 1 | |||||
| H3 | C | T | A | – | – | – | 1 | 1 | |||||||
| H4 | – | A | – | A | A | A | 1 | ||||||||
| H5 | – | T | – | A | A | – | 1 | ||||||||
| H6 | C | T | – | A | – | A | 1 | ||||||||
| H7 | – | T | – | A | – | – | 1 | 1 | |||||||
| H8 | – | T | A | – | – | A | 1 | 1 | |||||||
| H9 | – | T | A | – | – | – | 1 | 1 | 1 | ||||||
| H10 | – | A | – | A | A | – | 1 | ||||||||
| H11 | – | T | – | A | – | A | 1 | 1 | |||||||
| H12 | – | T | A | A | – | – | 6 | ||||||||