Table 3. Top 20 most highly expressed novel miRNAs identified in the 10 mothers studied in both cell and lipid HM fractions and across the three lactation stages examined (months 2, 4 and 6), with the total reads, and the number of samples that each miRNA was detected in (total samples n = 45).
miRNA species | Mature sequence | Total reads | Nucleotide length (nt) | Number of samples determined in (out of n = 45) |
---|---|---|---|---|
novel_mir_189 | GCCTGTCTGAGCGTCGCT | 751,632 | 18 | 13 |
novel_mir_2 | ATGTTGGATCAGGACATCC | 18,054 | 19 | 20 |
novel_mir_112 | GACCTCGCCGTCCCGCCCGCC | 5,608 | 21 | 8 |
novel_mir_4 | TCCATATCCCAACCTGTCAGAGT | 5,581 | 23 | 27 |
novel_mir_5 | AATGTGGCTTAGAACATG | 3,495 | 18 | 27 |
novel_mir_392 | GCGCGCCCCCGCCCCGGC | 1,520 | 18 | 14 |
novel_mir_472 | TAGACGGGCTCACATCACC | 1,288 | 19 | 10 |
novel_mir_1905 | TTAGGTCAAGGTGTAGCC | 1,242 | 18 | 2 |
novel_mir_471 | GACCTCGCCGTCCCGCCCGCCG | 1,200 | 22 | 2 |
novel_mir_2797 | GTCGGGGCGGCGGCGGCGGCG | 1,104 | 21 | 2 |
novel_mir_4933 | GTTAGGTCAAGGTGTAGCC | 1,080 | 19 | 1 |
novel_mir_1906 | GCGGCGGCGGCGGCGGGACCG | 927 | 21 | 2 |
novel_mir_1681 | TACGGATCTGGCTTCTGAGA | 795 | 20 | 4 |
novel_mir_397 | TTTAGACGGGCTCACATCACC | 766 | 21 | 7 |
novel_mir_3593 | GCGGCGGCGGCGGCGGCGGGGC | 756 | 22 | 1 |
novel_mir_3 | TCTGCAGGCTGGGATCTGGGAT | 753 | 22 | 17 |
novel_mir_110 | TCTGCAGGCTGGGATCTGGGA | 657 | 21 | 17 |
novel_mir_113 | ACTAGGATTGTGCTTCCCTGG | 622 | 21 | 23 |
novel_mir_197 | TGCACTACAGAACTTTGA | 592 | 18 | 24 |
novel_mir_116 | TGTAAACATCCTTGACTGA | 578 | 19 | 23 |