Table 1.
Summary of FST genes in rice according to the individual institute in the International Rice Functional Genomics Consortium (IRFGC)
| Institute | No. of FSTs | No. of mapped FSTs | No. of FSTs with insertion in genic region (55,986a) | No. of genes with FSTs in genic region |
|---|---|---|---|---|
| DJ-Ds-seq | 32,459 | 32,009 | 22,002 | 6,841 |
| Indica-Ds-seq | 2,499 | 2,464 | 1,539 | 641 |
| Affjp-Tos17 | 18,024 | 17,939 | 14,554 | 3,602 |
| Cirad-T-DNA | 29,262 | 27,870 | 17,709 | 5,629 |
| csiro-Ds | 611 | 585 | 398 | 286 |
| Gsnu-Ds | 1,072 | 1,050 | 732 | 484 |
| Ostid-Ds | 1,315 | 1,290 | 814 | 672 |
| PFG_FSTs-T-DNA | 107,171 | 105,739 | 59,707 | 20,889 |
| rifgp-T-DNA | 741 | 689 | 359 | 156 |
| rmd-T-DNA | 33,197 | 31,892 | 16,219 | 6,641 |
| ship-T-DNA | 12,614 | 9,385 | 4,808 | 1,340 |
| trim-T-DNA | 11,799 | 11,135 | 6,029 | 3,711 |
| Ucd-Ds/Dspm | 17,730 | 16,825 | 7,556 | 3,088 |
| Total | 268,496 | 258,872 | 152,426 | 29,664 |
aindicates the total number of loci annotated by the rice genome annotation project team (version 7.0)