. Author manuscript; available in PMC: 2016 Apr 28.

Published in final edited form as: Am J Med Genet B Neuropsychiatr Genet. 2003 Aug;121(1):100–104. doi: 10.1002/ajmg.b.20050

TABLE III.

Test for Excess Transmission of Multilocus Haplotypes of 12 SNPs in the SSTR5 Gene and Autism Using TRANSMIT

	Haplotype	Estimated frequency of haplotype^*	χ²	df	P value
SNP 3–5	1 1	0.35	0.99	1	0.32
	2 1	0.05	0.41	1	0.52
	1 2	0.47	0.001	1	0.97
	2 2	0.12	3.18	1	0.07
	Global		3.78	3	0.29
SNP 6–7	1 1	89	0.03	1	0.86
	2 1	7	1.13	1	0.29
	1 2	4	2.17	1	0.14
	Global		3.09	2	0.21
SNP 8–11	1 1	0.40	0.76	1	0.38
	2 1	0.036^*	2.59	1	0.11
	1 2	0.57	2.06	1	0.15
	Global		3.45	2	0.18^*
SNP 6-7-8-11	1 1 1 1	0.33	2.15	3	0.14
	2 1 1 1	0.06	1.87	3	0.17
	1 2 2 1	0.039^*	3.28	3	0.07
	1 1 1 2	0.56	1.94	3	0.16
	2 1 1 2	0.004^*	0.9995	3	0.32
	1 2 1 2	0.003^*	0.96	3	0.33
	Global		9.26	5	0.099^*
Global			6.69	3	0.08

P values of test of rare haplotypes, with frequencies less than 4%, are indicated with an asterisk.