Table 1.
Summary of differential expressed genes encoding c‐type cytochromes between soluble methane monooxygenase (sMMO) and particulate methane monooxygenase (pMMO) producing cells of Methylococcus capsulatus strain Bath. See also Table S2 for more information
| Locus Tag | Annotation/function | Fold change | Detected by MSa |
|---|---|---|---|
| MCA0318 | MauG family protein | −3.2 | ND |
| MCA0421 | Cytochrome c 553O family protein | 13.9 | S |
| MCA0423 | Cytochrome c 553O | 10.1 | S |
| MCA0424 | Multiheme c‐type cytochrome | 4.8 | S |
| MCA0426 | Multiheme c‐type cytochrome | 8.6 | S |
| MCA0428 | Cytochrome c 3 family protein | 7.2 | ND |
| MCA0428b | Cytochrome c 3 family protein | 3.7 | ND |
| MCA0429 | Multiheme c‐type cytochrome | 5.4 | ND |
| MCA0431 | Multiheme c‐type cytochrome | 4.3 | ND |
| MCA0432 | Multiheme c‐type cytochrome | 2.7 | ND |
| MCA0433 | Multiheme c‐type cytochrome | 2.3 | ND |
| MCA0444 | MauG family protein | 2.7 | S, OMb |
| MCA0879 | Subunit II of terminal cytochrome c oxidase | −1.8 | IMc |
| MCA1185 | Diheme cytochrome c 4 family protein | 13.8 | IM, OMb |
| MCA1187 | Membrane‐embedded c‐type cytochrome | 28.3 | IM, OMb |
| MCA1906 | MauG family protein | 14.7 | S |
| MCA1960 | Cytochrome c 1 subunit of ubiquinol‐cytochrome c reductase | −2.6 | ND |
| MCA2010 | Predicted c‐type cytochrome | 3.2 | ND |
| MCA2160 | Cytochrome c 553O family protein | 9.0 | ND |
| MCA2259 | Cytochrome c 553O family protein | 11.3 | S |
| MCA2590 | MauG family protein | 12.0 | S |
a
Peptides were analyzed with LTQ‐ORBITRAP. S, surface fraction; P, periplasma fraction; IM, inner membrane fraction; OM, washed outer membrane fraction; ND, not detected.
b
Only detected in sMMO‐producing cells.
c
Only detected in pMMO‐producing cells.