Table 5. Genes involved in pollen-pistil interaction.
Gene | Biological Process | Tissue | References | BLAST best matcha | EST IDb | Length (bp) | E-valuec |
---|---|---|---|---|---|---|---|
Lipid transfer protein precursor (LTP) | Adhesion of pollen tubes to transmitting tissue | Pistil | [26, 55] | [L. longiflorum] AF171094 | unigene05516 | 841 | 3e-26 |
unigene08514* | 610 | 6e-33 | |||||
unigene07617* | 669 | 1e-30 | |||||
unigene07897* | 648 | 1e-30 | |||||
unigene07066* | 708 | 6e-29 | |||||
Pollen-specific gene (LAT52) | Hydration and pollen tube growth | Pollen | [26, 56] | [S. lycopersicum] CAA33854.1 | unigene06374* | 764 | 2e-53 2e-051 1e-028 5e-028 8e-028 |
unigene06415 | 762 | 2e-051 | |||||
unigene07787 | 658 | 1e-028 | |||||
unigene06119 | 785 | 5e-028 | |||||
unigene05934 | 802 | 8e-028 | |||||
unigene05528 | 829 | 9e-028 | |||||
unigene05190 | 862 | 8e-027 | |||||
unigene06002 | 797 | 9e-027 | |||||
unigene05771 | 816 | 2e-026 | |||||
unigene06255 | 777 | 2e-026 | |||||
unigene05964 | 800 | 5e-026 | |||||
unigene05896 | 810 | 8e-026 | |||||
unigene06066 | 794 | 1e-025 | |||||
unigene07219 | 684 | 3e-024 | |||||
unigene06532 | 752 | 3e-023 | |||||
Pollen-specific gene (NTP101) | Pollen tube growth | Pollen | [57] | [N. tabacum] AAQ90182.1 | unigene03925* | 991 | 1e-127 |
Pectin methylesterase (PME) | Pollen tube growth | Pollen | [58] | [N.acum] AAX13972.1 | unigene00539 | 1,811 | 1e-170 |
unigene00473 | 1,867 | 1e-169 | |||||
unigene01185* | 1,493 | 6e-041 | |||||
unigene01763* | 1,317 | 5e-039 | |||||
Oleosin (OLE) | Pollen hydration | Pollen | [26] | [C. oleifera] ABF57563.1 | unigene08062* | 638 | 3e-31 |
Beta-1,3glucanase (βGLU) | Callose degradation in the process of tetrad dissolution | Anther | [59] | [O. sativa] BAC02926.1 | unigene00872* | 1,632 | 3e-056 |
Olive candidate genes that are putatively involved in pollen-pistil interactions. The genes were confirmed by RT-qPCR experiments.
aSpecies and accession number of the genes that were used as reference sequences for tBLASTx search.
bBest hits of the olive transcripts, as identified by a bi-directional BLAST search.
cE-value of the best hit identified by the BLASTX search.
*Transcripts selected for the RT-qPCR analyses.