Table 4. Characteristic of samples with mixed ompA genotype or conflicting results between genotyping methodologies.
Origin of samples | Sample ID | Type of sample | Genotyping technique | ||
---|---|---|---|---|---|
ompA Sequence | PCR-RFLP | Microarray | |||
UniversityHospital | G6348 | Male urethral swab | H | H | H+E |
G6513 | Male urethral swab | N/A | F | F+E | |
G6509 | Cervical swab | F | F | F+E | |
G6484 | Cervical swab | Ia | I | I+E | |
G6482 | Cervical swab | H | H | Not conclusive | |
G6477 | Cervical swab | N/A | D | Not conclusive | |
G6538 | Male urethral swab | N/A | E | D | |
ConcepciónChile | G6476 | Cervical swab | Mix¥ | E | E+Da |
G6472 | Cervical swab | D | D | D+Da | |
G6495 | Cervical swab | Ja | J | J+E | |
G6441 | Cervical swab | N/A | H | Not conclusive | |
National Hospital | G6383 | Cervical swab | J | J | J+E |
G6399 | Cervical swab | Mix¥ | E+F | E+F | |
G6411 | Cervical swab | D | D | D+L2 | |
G6410 | Cervical swab | Mix¥ | E | F+E | |
G6405 | Cervical swab | Mix¥ | J | E+J | |
G6387 | Cervical swab | N/A | Not conclusive | Not conclusive | |
G6400 | Conjunctivae swab | E | E | F+E | |
G6401 | Conjunctivae swab | Mix¥ | E | J+E+F | |
G6391 | Conjunctivae swab | F | F | F+E |
N/A: not available due to low DNA content or no sample left to perform analysis.
¥not analyzable due to mixed genotype infection.