Table 1.
The taxonomy of Structural Genomics: list of the different SG centers, according to the contents of the pdbx_SG_project fields in the mmCIF files in the PDB (curated manually), as of December 31, 2015. Joint deposits for two or more centers are included in the total for each center.
| Center | Country | Funding | # Structures |
|---|---|---|---|
| Accelerated Technologies Center for Gene to 3D Structure (ATCG3D) | USA | PSI-2 specialized center | 29 |
| Assembly, Dynamics and Evolution of Cell-Cell and Cell-Matrix Adhesions (CELLMAT) | USA | PSI:Biology partnership | 2 |
| Atoms-to-Animals: The Immune Function Network (IFN) | USA | PSI:Biology partnership | 31 |
| Bacterial targets at IGS-CNRS, France (BIGS) | France | EU | 4 |
| Berkeley Structural Genomics Center (BSGC) | USA | PSI-1 | 103 |
| Center for Eukaryotic Structural Genomics (CESG) | USA | PSI-1,2 | 218 |
| Center for High-Throughput Structural Biology (CHTSB) | USA | PSI-2 specialized center | 6 |
| Center for Structural Genomics of Infectious Diseases (CSGID) | USA | NIAID | 811 |
| Center for Structures of Membrane Proteins (CSMP) | USA | PSI-2 and PSI:Biology specialized center | 28 |
| Chaperone-Enabled Studies of Epigenetic Regulation Enzymes (CEBS) | USA | PSI:Biology partnership | 6 |
| Enzyme Discovery for Natural Product Biosynthesis (NatPro) | USA | PSI:Biology partnership | 66 |
| Enzyme Function Initiative (EFI) | USA | NIH “glue grant” | 338 |
| GPCR Network (GPCR) | USA | PSI:Biology membrane protein center | 48 |
| Integrated Center for Structure and Function Innovation (ISFI) | USA | PSI-2 specialized center | 28 |
| Israel Structural Proteomics Center (ISPC) | Israel | EU | 45 |
| Joint Center for Structural Genomics (JCSG) | USA | PSI-1,2, Biology large scale center | 1601 |
| Marseilles Structural Genomics Program @ AFMB (MSGP) | France | EU | 12 |
| Medical Structural Genomics of Pathogenic Protozoa (MSGPP) | USA | US | 35 |
| Membrane Protein Structural Biology Consortium (MPSBC) | USA | PSI:Biology membrane protein center | 3 |
| Membrane Protein Structures by Solution NMR (MPSbyNMR) | USA | PSI:Biology membrane protein center | 5 |
| Midwest Center for Structural Genomics (MCSG) | USA | PSI-1,2, Biology large scale center | 1872 |
| Mitochondrial Protein Partnership (MPP) | USA | PSI:Biology partnership | 10 |
| Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI) | Canada | Canadian research organizations | 126 |
| Mycobacterium Tuberculosis Structural Proteomics Project (XMTB) | Germany | German government | 36 |
| New York Consortium on Membrane Protein Structure (NYCOMPS) | USA | PSI:Biology membrane protein center | 58 |
| New York SGX Research Center for Structural Genomics (NYSGXRC) | USA | PSI-1,2 large scale center | 1042 |
| New York Structural Genomics Research Consortium (NYSGRC) | USA | PSI:Biology large scale center | 344 |
| Northeast Structural Genomics Consortium (NESG) | USA | PSI-1,2, Biology large scale center | 1212 |
| Nucleocytoplasmic Transport: a Target for Cellular Control (NPCXtals) | USA | PSI:Biology partnership | 5 |
| Ontario Centre for Structural Proteomics (OCSP) | Canada | Canadian research organizations | 35 |
| Oxford Protein Production Facility (OPPF) | UK | EU | 33 |
| Paris-Sud Yeast Structural Genomics (YSG) | France | EU | 6 |
| Partnership for Nuclear Receptor Signaling Code Biology (NHRs) | USA | PSI:Biology partnership | 3 |
| Partnership for Stem Cell Biology (STEMCELL) | USA | PSI:Biology partnership | 20 |
| Partnership for T-Cell Biology (TCELL) | USA | PSI:Biology partnership | 48 |
| Program for the Characterization of Secreted Effector Proteins (PCSEP) | USA | PSI:Biology partnership | 17 |
| Protein Structure Factory (PSF) | Germany | EU | 2 |
| RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Japan | Protein 3000 project | 2743 |
| Scottish Structural Proteomics Facility (SSPF) | UK | EU | 11 |
| Seattle Structural Genomics Center for Infectious Disease (SGCID) | USA | NIAID | 801 |
| Southeast Collaboratory for Structural Genomics (SECSG) | USA | PSI-1 | 121 |
| Structural Genomics Consortium (SGC) | International | Industry, charities, Canadian research organizations | 1404 |
| Structural Genomics Consortium for Research on Gene Expression (SGCGES) | USA | PSI:Biology partnership | 2 |
| Structural Genomics of Pathogenic Protozoa Consortium (SGPP) | USA | PSI-1 | 71 |
| Structural Proteomics in Europe (SPINE) | EU | EU | 119 |
| Structural Proteomics in Europe 2 (SPINE-2) | EU | EU | 8 |
| Structure 2 Function Project (S2F) | USA | US | 54 |
| Structure-Function Analysis of Polymorphic CDI Toxin-Immunity Protein Complexes (UC4CDI) | USA | PSI:Biology partnership | 3 |
| Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI) | USA | PSI:Biology partnership | 36 |
| TB Structural Genomics Consortium (TBSGC) | International | PSI-1; international | 285 |
| Transcontinental EM Initiative for Membrane Protein Structure (TEMIMPS) | USA | PSI:Biology membrane protein center | 2 |