Table 2. Genome features of two co-infection variant strains (Reo/PA/Layer/01224a/14 and Reo/PA/Layer/01224b/14) of avian orthoreovirus (ARV) isolated from ARV-affected young layer chickens.

Reo/PA/Layer/01224a/14						Reo/PA/Layer/01224b/14
Contig name	Average coverage	Encoded protein	Length (bp)			Contig name	Average coverage	Encoded protein	Length (bp)
			5′end	ORF	3′end				5′end	ORF	3′end
L1a	125.82	λA	20	3882	56	L1B	59.06	λA	20	3882	56
L2a	106.79	λB	13	3780	36	L2B	46.04	λB	13	3780	36
L3b	202.55	λC	12	3858	37	L3A	30.72	λC	12	3858	37
M1a	184.38	μA	12	2199	72	M1B	65.44	μA	12	2199	72
M21	254.01	μB	29	2031	98	M2a	254.01	μB	29	2031	98
M3b	204	μNS	24	1908	64	M3A	26.82	μNS	24	1908	64
S1a	271.28	p10	22	300	33	S1B	44.63	p10	22	300	33
		p17		459				p17		441
		σC		981				σC		981
S2a	247.95	σA	15	1251	58	S2B	46.89	σA	15	1251	58
S3b	246.3	σB	30	1104	68	S3A	134.3	σB	30	1104	68
S4b	174.96	σNS	23	1104	65	S4A	65.05	σNS	23	1104	65

The two avian orthoreovirus (ARV) variant strains had the same M2 contig.