Table 2.
Species | HDA patterns | Size of Cyt b sequence | No. of sequenced PCR products | Results of the search for sequence identity in GenBank | ||
---|---|---|---|---|---|---|
Species with highest identity | GenBank: accession number | Identity (%) | ||||
Mammal | P3 | 315 bp | 16 | Homo sapiens (human) | AY509658.1 | 99 |
P1 | 289 bp | 6 | Octodontomys gliroides (rodent) | AF370706.1 | 98 | |
P6 | 290 bp | 6 | Octodontomys gliroides (rodent) | GQ121127.1 | 99 | |
P2 | 264 bp | 3 | Galea musteloides (rodent) | GU067494.1 | 99–100 | |
P7 | 264 bp | 3 | Galea musteloides (rodent) | GU067530.1 | 100 | |
P13 | 235 bp | 1 | Galea musteloides (rodent) | GU067494.1 | 99 | |
P16 | 235 bp | 1 | Galea musteloides (rodent) | GU067513.1 | 100 | |
P4 | 255 bp | 5 | Lagidium viscacia (rodent) | AY 254887.1 | 99 | |
P8 | 280 bp | 1 | Graomys s.p. (rodent) | AF159291.1 | 88 | |
P9 | 290 bp | 1 | Graomys domorum (rodent) | AF159291.1 | 99 | |
P11 | 287 bp | 1 | Graomys domorum (rodent) | AF159291.1 | 99 | |
P12 | 319 bp | 1 | Akodon glaucinus (rodent) | KC841384.1 | 95 | |
P10 | 310 bp | 1 | Equus asinus (donkey) | FJ428527.1 | 92–99 | |
P14 | 300 bp | 1 | Felis catus (cat) | AY509646.1 | 99 | |
P15 | 290 bp | 1 | Phyllotis wolffshoni (rodent) | AY956698.1 | 98 | |
P17 | 230 bp | 2 | Phyllotis xantophigus chiliensis (rodent) | AY341053.1 | 96–99 | |
Bird | P18 | 322 bp | 1 | Subligatus modestus | AF447623.2 | 100 |
P5 | 281 bp | 6 | Gallus gallus (chicken) | EU 839454.1 | 100 | |
Reptile | Absenta | 285 bp | 1 | Tropidurus s.p. (lizard) | EF616030.1 | 89 |
Absenta | 294 bp | 1 | Gymnodactylus s.p. (lizard) | AY630397.1 | 83 |
awithout profile