Table 1.
Primary information for single-nucleotide polymorphisms (SNPs) genotyped
| SNPs | Chromosome position | SNP location in gene | Major > Minor allele | Call rate | HWE (control) | |
|---|---|---|---|---|---|---|
| 1 | rs12778366a | chr10:69313085 | 5′ upstream | T > C | 100 % | 0.55 |
| 2 | rs3758391a | chr10:69313348 | 5′ upstream | T > C | 99.86 % | 1 |
| 3 | rs3740051a | chr10:69313965 | 5′ upstream | A > G | 99.79 % | 0.8 |
| 4 | rs33957861 | chr10:69316982 | Intron | C > T | 99.93 % | 0.9 |
| 5 | rs7896005a | chr10:69321131 | Intron | A > G | 99.93 % | 0.89 |
| 6 | rs12413112 | chr10:69321872 | Intron | G > A | 100 % | 1 |
| 7 | rs11599176 | chr10:69323781 | Intron | A > G | 99.93 % | 1 |
| rs10823107a,b | chr10:69330230 | Intron | ||||
| 8 | rs4746720a | chr10:69346836 | 3′ untranslate region | T > C | 100 % | 0.074 |
HWE indicates Hardy-Weinberg equilibrium
aTag SNPs selected from the HapMap database
bSNPs which failed in genotyping and was removed from the analysis