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. Author manuscript; available in PMC: 2016 Apr 20.
Published in final edited form as: Nature. 2015 Apr 22;520(7549):692–696. doi: 10.1038/nature14426

Extended Data Table 4.

CT26 mutated epitopes encoded in pentatope 1+2

Pentatope Mutation Gene Mutated sequence used for vaccination Substitution (WT, AA#, Mut) Reactive T cell subtype
1 CT26-M19 Tmem87a QAIVRGCSMPGPWRSGRLLVSRRWSVE G63R CD8+
1 CT26-M39 Als2 GYISRVTAGKDSYIALVDKNIMGYIAS L675I CD8+
1 CT26-M13 Nphp3 AGTQCEYWASRALDSEHSIGSMIQLPQ G234D CD4+
1 CT26-M55 Dkk2 EGDPCLRSSDCIDEFCCARHFWTKICK G192E CD4+
1 CT26-M68 Steap2 VTSIPSVSNALNWKEFSFIQSTLGYVA R388K CD4+
2 CT26-M20 Slc4a3 PLLPFYPPDEALEIGLELNSSALPPTE T373I CD4+
2 CT26-M26 E2f8 VILPQAPSGPSYATYLQPAQAQMLTPP I522T CD8+
2 CT26-M03 Slc20a1 DKPLRRNNSYTSYIMAICGMPLDSFRA T425I CD4+
2 CT26-M37 Dhx35 EVIQTSKYYMRDVIAIESAWLLELAPH T646I CD4+
2 CT26-M27 Agxt2l2 EHIHRAGGLFVADAIQVGFGRIGKHFW E247A CD4+

Ten immunogenic mutated epitopes were used for generation of two pentatopes used for therapeutic vaccination shown in Fig. 3b. WT, wild type; AA#, position of mutated amino acid; Mut, mutation.