Table 3.
Sequence and polymorphic profile of ISSR primers used in the study
| S1. | Code | Sequences (5′-3′) | Band sizes (bp) | TB | PB | PP | PIC |
|---|---|---|---|---|---|---|---|
| 1 | UBC 811 | (GA)8C | 100–2000 | 11 | 11 | 100.00 | 0.34 |
| 2 | UBC 836 | (AG)8YA | 125–2500 | 7 | 3 | 42.85 | 0.16 |
| 3 | UBC 842 | (GA)8YG | 100–2000 | 8 | 5 | 62.50 | 0.21 |
| 4 | UBC 851 | (GT)8YG | 100–2500 | 2 | 2 | 100.00 | 0.31 |
| 5 | UBC 855 | (AC)8YT | 100–3000 | 8 | 8 | 100.00 | 0.29 |
| 6 | UBC 889 | (AC)7DBD | 150–3500 | 5 | 5 | 100.00 | 0.32 |
| 7 | UBC 890 | (GT)7VHV | 100–1500 | 6 | 6 | 100.00 | 0.30 |
| 8 | ISSR 1 | (ACC)6C | 120–2500 | 8 | 8 | 100.00 | 0.28 |
| 9 | ISSR 3 | (ACC)6T | 100–2800 | 7 | 7 | 100.00 | 0.20 |
| 10 | ISSR 4 | (AGC)6C | 225–3000 | 6 | 6 | 100.00 | 0.31 |
| 11 | ISSR 5 | (AGC)6G | 125–3500 | 7 | 7 | 100.00 | 0.22 |
| 12 | ISSR 6 | (AGC)6T | 100–1500 | 6 | 6 | 100.00 | 0.32 |
| 13 | ISSR 7 | (AC)9T | 350–3200 | 4 | 4 | 100.00 | 0.36 |
| 14 | ISSR 9 | (CAC)7A | 100–2500 | 4 | 4 | 100.00 | 0.34 |
| 15 | ISSR 10 | (CAC)7T | 250–3400 | 2 | 1 | 50.00 | 0.13 |
| 16 | ISSR 11 | (CTC)6A | 250–2500 | 4 | 4 | 100.00 | 0.30 |
| 17 | ISSR 14 | (GCT)6C | 200–3500 | 8 | 7 | 87.50 | 0.22 |
| 18 | ISSR 18 | (TCG)6G | 300–3200 | 6 | 6 | 100.00 | 0.32 |
| 19 | ISSR 20 | (TGC)5C | 100–2500 | 11 | 11 | 100.00 | 0.30 |
| 20 | ISSR 21 | (TG)8C | 125–2200 | 9 | 2 | 22.22 | 0.11 |
| 21 | ISSR 24 | (AC)9C | 150–3500 | 3 | 3 | 100.00 | 0.20 |
| Total | 132 | 116 | – | – | |||
| Average | 6.28 | 5.52 | 87.87 | 0.15 | |||
Where, Y = (C, T), B = (C, G, T), D = (A, G, T), H = (A, C, T), V = (A, C, G)
TB total bands, PB polymorphic bands, PP percentage polymorphism, PIC polymorphism information content