Table 2. Average type 1 error rates of the statistic for testing interaction between two genes with marginal effect at one gene consisting only rare variants with 5 traits over randomly selected 50,000 pairs of genes from the whole exome.
Sample Size | 0.05 | 0.01 | 0.001 |
---|---|---|---|
1000 | 0.0785 | 0.0177 | 0.0018 |
2000 | 0.0672 | 0.0154 | 0.0017 |
3000 | 0.0604 | 0.0149 | 0.0010 |
4000 | 0.0555 | 0.0120 | 0.0012 |
5000 | 0.0510 | 0.0132 | 0.0009 |