Table 3. Average type 1 error rates of the statistic for testing interaction between two genes with marginal effects at two genes consisting only rare variants with 5 traits over randomly selected 50,000 pairs of genes from the whole exome.
Sample Size | 0.05 | 0.01 | 0.001 |
---|---|---|---|
1000 | 0.0715 | 0.0152 | 0.0018 |
2000 | 0.0664 | 0.0133 | 0.0013 |
3000 | 0.0596 | 0.0105 | 0.0014 |
4000 | 0.0508 | 0.0098 | 0.0010 |
5000 | 0.0511 | 0.0106 | 0.0012 |