Table 6. P-values of 60 pairs of SNPs between genes CETP on chromosome 16 and GPR123 on chromosome 10 for testing interaction affecting both HDL and LDL.
| Gene 1 | Gene 2 | P-value | ||||
|---|---|---|---|---|---|---|
| CETP | GPR123 | 8.83E-11 | ||||
| SNP1 | BP | MAF | SNP2 | BP | MAF | P-Value |
| rs9930761 | 57007192 | 0.0672123 | rs367825198 | 134940686 | 0.00024802 | 4.53E-05 |
| rs5883 | 57007353 | 0.0577877 | rs367825198 | 134940686 | 0.00024802 | 4.90E-05 |
| rs148628525 | 56995963 | 0.00024802 | rs11101914 | 134910629 | 0.25198413 | 1.14E-03 |
| rs1800777 | 57017319 | 0.03497024 | rs2806452 | 134942166 | 0.36383929 | 2.58E-03 |
| rs1800774 | 57015545 | 0.34945437 | rs115735367 | 134940724 | 0.0014881 | 3.03E-03 |
| rs140547417 | 57009022 | 0.00124008 | rs2806452 | 134942166 | 0.36383929 | 3.46E-03 |
| rs5883 | 57007353 | 0.0577877 | rs12219529 | 134916366 | 0.14409722 | 3.69E-03 |
| rs140547417 | 57009022 | 0.00124008 | rs11101914 | 134910629 | 0.25198413 | 3.94E-03 |
| rs5883 | 57007353 | 0.0577877 | rs2806453 | 134942319 | 0.04464286 | 5.22E-03 |
| rs9930761 | 57007192 | 0.0672123 | rs115735367 | 134940724 | 0.0014881 | 5.98E-03 |
| rs5883 | 57007353 | 0.0577877 | rs2806452 | 134942166 | 0.36383929 | 6.07E-03 |
| rs1800777 | 57017319 | 0.03497024 | rs10776696 | 134942340 | 0.11433532 | 6.12E-03 |
| rs1532625 | 57005301 | 0.41914683 | rs115735367 | 134940724 | 0.0014881 | 7.16E-03 |
| rs9930761 | 57007192 | 0.0672123 | rs118125186 | 134912135 | 0.00421627 | 7.23E-03 |
| rs5883 | 57007353 | 0.0577877 | rs118125186 | 134912135 | 0.00421627 | 7.50E-03 |
| rs1532625 | 57005301 | 0.41914683 | rs145543174 | 134941843 | 0.00049603 | 7.90E-03 |
| rs1532625 | 57005301 | 0.41914683 | rs118125186 | 134912135 | 0.00421627 | 8.49E-03 |
| rs140547417 | 57009022 | 0.00124008 | rs45586231 | 134942832 | 0.06547619 | 8.93E-03 |
| rs9930761 | 57007192 | 0.0672123 | rs12219529 | 134916366 | 0.14409722 | 9.17E-03 |
| rs1532625 | 57005301 | 0.41914683 | rs45586231 | 134942832 | 0.06547619 | 9.23E-03 |
| rs34065661 | 56995935 | 0.00124008 | rs115735367 | 134940724 | 0.0014881 | 9.56E-03 |
| rs140547417 | 57009022 | 0.00124008 | rs11101942 | 134940862 | 0.11929563 | 9.62E-03 |
| rs9930761 | 57007192 | 0.0672123 | rs2806452 | 134942166 | 0.36383929 | 9.69E-03 |
| rs140547417 | 57009022 | 0.00124008 | rs10776696 | 134942340 | 0.11433532 | 9.76E-03 |
| rs1532625 | 57005301 | 0.41914683 | rs4838796 | 134912098 | 0.03298611 | 1.12E-02 |
| rs1800774 | 57015545 | 0.34945437 | rs118125186 | 134912135 | 0.00421627 | 1.19E-02 |
| rs1800774 | 57015545 | 0.34945437 | rs2806452 | 134942166 | 0.36383929 | 1.33E-02 |
| rs5883 | 57007353 | 0.0577877 | rs11101916 | 134912314 | 0.1703869 | 1.37E-02 |
| rs5883 | 57007353 | 0.0577877 | rs11101942 | 134940862 | 0.11929563 | 1.46E-02 |
| rs5883 | 57007353 | 0.0577877 | rs45586231 | 134942832 | 0.06547619 | 1.59E-02 |
| rs371233223 | 57005272 | 0.00024802 | rs11101916 | 134912314 | 0.1703869 | 1.68E-02 |
| rs371233223 | 57005272 | 0.00024802 | rs2806452 | 134942166 | 0.36383929 | 1.70E-02 |
| rs1532625 | 57005301 | 0.41914683 | rs2806452 | 134942166 | 0.36383929 | 1.75E-02 |
| rs13306230 | 57003250 | 0.00124008 | rs2806452 | 134942166 | 0.36383929 | 2.21E-02 |
| rs34611098 | 57004951 | 0.00124008 | rs2806452 | 134942166 | 0.36383929 | 2.21E-02 |
| rs5880 | 57015091 | 0.04861111 | rs2806452 | 134942166 | 0.36383929 | 2.23E-02 |
| rs9930761 | 57007192 | 0.0672123 | rs11101941 | 134940779 | 0.01116071 | 2.28E-02 |
| rs1800777 | 57017319 | 0.03497024 | rs118125186 | 134912135 | 0.00421627 | 2.33E-02 |
| rs5880 | 57015091 | 0.04861111 | rs118125186 | 134912135 | 0.00421627 | 2.35E-02 |
| rs9930761 | 57007192 | 0.0672123 | rs2806453 | 134942319 | 0.04464286 | 2.47E-02 |
| rs182237338 | 57012174 | 0.00198413 | rs12219529 | 134916366 | 0.14409722 | 2.57E-02 |
| rs5883 | 57007353 | 0.0577877 | rs11101941 | 134940779 | 0.01116071 | 2.68E-02 |
| rs5880 | 57015091 | 0.04861111 | rs11101916 | 134912314 | 0.1703869 | 2.94E-02 |
| rs9930761 | 57007192 | 0.0672123 | rs45586231 | 134942832 | 0.06547619 | 2.95E-02 |
| rs9930761 | 57007192 | 0.0672123 | rs11101914 | 134910629 | 0.25198413 | 3.19E-02 |
| rs376545293 | 57016085 | 0.00024802 | rs11101916 | 134912314 | 0.1703869 | 3.23E-02 |
| rs9930761 | 57007192 | 0.0672123 | rs11101942 | 134940862 | 0.11929563 | 3.24E-02 |
| rs376545293 | 57016085 | 0.00024802 | rs11101914 | 134910629 | 0.25198413 | 3.28E-02 |
| rs139594305 | 57007286 | 0.00024802 | rs4838796 | 134912098 | 0.03298611 | 3.46E-02 |
| rs376545293 | 57016085 | 0.00024802 | rs2806452 | 134942166 | 0.36383929 | 3.48E-02 |
| rs139594305 | 57007286 | 0.00024802 | rs12219529 | 134916366 | 0.14409722 | 3.55E-02 |
| rs201267603 | 57005220 | 0.00099206 | rs12219529 | 134916366 | 0.14409722 | 3.85E-02 |
| rs13306230 | 57003250 | 0.00124008 | rs11101916 | 134912314 | 0.1703869 | 4.00E-02 |
| rs34611098 | 57004951 | 0.00124008 | rs11101916 | 134912314 | 0.1703869 | 4.00E-02 |
| rs9930761 | 57007192 | 0.0672123 | rs11101916 | 134912314 | 0.1703869 | 4.11E-02 |
| rs1800774 | 57015545 | 0.34945437 | rs189113844 | 134941821 | 0.00173611 | 4.35E-02 |
| rs1800774 | 57015545 | 0.34945437 | rs11101941 | 134940779 | 0.01116071 | 4.38E-02 |
| rs28381708 | 57007413 | 0.00124008 | rs11101914 | 134910629 | 0.25198413 | 4.57E-02 |
| rs34855278 | 57015076 | 0.0014881 | rs11101914 | 134910629 | 0.25198413 | 4.69E-02 |
| rs1532625 | 57005301 | 0.41914683 | rs10776696 | 134942340 | 0.11433532 | 4.88E-02 |