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. 2016 Apr 23;17:301. doi: 10.1186/s12864-016-2626-1

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© Vicente et al. 2016

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 2 — Phylogenetic relationships between Serratia sp. LCN16 and other Serratia representatives. Green diamonds indicate the phytosphere Serratia complex. a Phylogeny based on 16S rRNA gene (1411 bp). b Phylogeny based on housekeeping genes (rpoB, gyrB, dnaJ and atpD) (8808 bp). Numbers above the clades are bootstrap values (1,000 replicates). Maximum likelihood (ML) trees were constructed using: (A) GTR + G + I, generalized time-reversible model with gamma distribution and proportion of invariable sites; and (B) K2 + G, Kimura 2-parameters with gamma distribution. Model determination and construction of ML trees were performed in MEGA 6 [67]