Table 1.
Sample name | TC | TL | TH |
---|---|---|---|
Raw reads number | 19,078,944 | 16,423,026 | 15,980,253 |
Clean reads number | 19,014,805 | 16,240,779 | 15,911,017 |
Total mapped reads | 16,136,606 (84.86%) | 13,237,006 (81.50%) | 13,223,450 (83.11%) |
Uniquely mapped reads | 12,995,710 (80.54%) | 10,558,070 (79.76%) | 10,524,303 (79.59%) |
Multiple mapped reads | 3,140,896 (19.46%) | 2,678,936 (20.24%) | 2,699,147 (20.41%) |
Bases number | 3,840,510,457 | 3,279,979,674 | 3,213,524,760 |
GC content | 43.54% | 44.23% | 44.40% |
Q30 | 90.86% | 91.10% | 91.86% |