Table 2. Association of two SNPs with Behçet’s Disease.

Gene	SNP	Stage	Genotype/Allele	BD		Controls		P Value	Pc Value	OR (95% CI)
				N	%	N	%
ITGAX (CD11c)	rs2929	First	AA	15	3.8	23	3.8	0.986	NS	1.01 (0.52–1.95)
			AG	82	21.0	193	32.0	1.453 × 10−4	0.019	0.56 (0.42–0.76)
			GG	294	75.2	387	64.2	2.606 × 10−4	0.034	1.69 (1.27–2.25)
			G	670	85.7	967	80.2	0.002	NS	1.48 (1.16–1.89)
		Second	AA	12	1.6	40	2.7	0.107	NS	0.59 (0.31–1.13)
			AG	180	23.7	470	31.3	1.974 × 10−4	1.184 × 10−3	0.69 (0.56–0.84)
			GG	566	74.7	994	66.1	3.135 × 10−5	1.881 × 10−4	1.51 (1.24–1.84)
			G	1312	86.5	2458	81.7	3.904 × 10−5	7.808 × 10−5	1.44 (1.21–1.71)
		Combined	AA	27	2.3	63	3.0	0.287	NS	0.78 (0.50–1.23)
			AG	262	22.8	663	31.5	1.618 × 10−7	2.087 × 10−5	0.64 (0.55–0.76)
			GG	860	74.8	1381	65.5	4.320 × 10−8	5.573 × 10−6	1.56 (1.33–1.84)
			G	1982	86.2	3425	81.3	3.252 × 10−7	1.398 × 10−5	1.45 (1.25–1.67)
CD6	rs11230563	First	CC	252	64.5	468	77.6	5.721 × 10−6	7.380 × 10−4	0.52 (0.39–0.69)
			CT	128	32.7	121	20.1	6.685 × 10−6	8.624 × 10−4	1.94 (1.45–2.59)
			TT	11	2.8	14	2.3	0.629	NS	1.22 (0.55–2.71)
			C	632	80.8	1057	87.6	3.189 × 10−5	1.371 × 10−3	0.59 (0.46–0.76)
		Second	CC	501	66.1	1137	75.6	1.811 × 10−6	1.087 × 10−5	0.63 (0.52–0.76)
			CT	238	31.4	349	23.2	2.714 × 10−5	1.628 × 10−4	1.52 (1.25–1.84)
			TT	19	2.5	18	1.2	0.020	NS	2.12 (1.11–4.07)
			C	1240	81.8	2623	87.2	1.176 × 10−6	2.352 × 10−5	0.66 (0.56–0.78)
		combined	CC	753	65.5	1605	76.2	8.501 × 10−11	1.097 × 10−8	0.60 (0.51–0.70)
			CT	366	31.9	470	22.3	2.532 × 10−9	3.266 × 10−7	1.63 (1.39–1.91)
			TT	30	2.6	32	1.5	0.029	NS	1.74 (1.05–2.88)
			C	1872	81.5	3680	87.3	1.766 × 10−10	7.594 × 10−9	0.64 (0.56–0.73)

Pc, Bonferroni corrected p value; NS, not significant; SNP, single nucleotide polymorphism.