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. 2016 Apr 4;113(16):4416–4421. doi: 10.1073/pnas.1601910113

Fig. S3.

Fig. S3.

Rooted single-gene and supermatrix estimated phylogenies for Symbiodinium spp. Shown are single-gene and supermatrix estimated phylogenies (Bayesian analysis with nodes support assessed through posterior probabilities) for a suite of A–I clade sequences (gray), including subcladal C sequences (C3, C1, C41, and C39; yellow) and S. thermophilum sequences from the PAG (green), Gulf of Oman (blue), and Red Sea (red). For each phylogeny, a full tree is illustrated on the left, in which the clade C subtree is collapsed. The resolution of this collapsed subtree is shown in detail to the right. Numbers in parentheses represent multiple sequences resolving at the same position and are color coded according to collection site and sequence type (Gulf of Oman, blue; PAG, green; Red Sea, red; reference sequence, yellow). Nodes supported with PPs above 0.8 are not displayed. Nodes with supports below 0.8 are marked with an asterisk.