Table 2.
List of predicted signaling pathways for differentially expressed genes between the MSC and sham groups
| Pathway | Count | % | p | Corrected pa | FE | Genes |
|---|---|---|---|---|---|---|
| Cell cycle | 10 | 5.68 | 1.60E-05 | 1.23E-03 | 6.52 | Plk1, Bub1, Pkmyt1, Ttk, Cdc20, Pttg1, Mcm2, Mcm3, Ccna2, Mcm6 |
| Systemic lupus erythematosus | 8 | 4.55 | 8.80E-05 | 3.38E-03 | 7.31 | C1qb, Tnf, Fcgr2b, Fcgr1a, LOC498276, Hist1h2ail, Fcgr3a, C1qc |
| FcγR-mediated phagocytosis | 7 | 3.98 | 5.93E-04 | 1.51E-02 | 6.54 | Arpc1b, Fcgr2b, Rac2, Ncf1, Hck, Fcgr1a, LOC498276 |
a
p-value after Benjamini-Hochberg correction
The full names of genes are described in Supplementary Table S1.
The genes italicized denote downregulated genes in the MSC group compared to the sham group.
FE, fold enrichment; FcγR, Fc-gamma receptor