Table 1.
A master table showing pertinent information to the detection of 32 eQTLs and the miRNAs to which they are linked
Disorder | miRNA | miRNA origin | Chromosome | miRNA base pair location | eQTL | eQTL base pair location | Alleles | Global MAF | eQTL p value | eQTL q value |
---|---|---|---|---|---|---|---|---|---|---|
SZ/BD | hsa-miR-34a | Intergenic | 1 | 9151668-9151777 | rs12119878 | 9158662 | G/T | 0.1967 | 1.55 × 10−4 | 1.08 × 10−2 |
SZ | hsa-miR-138 | Intergenic | 3 | 44114212-44114310 | rs6788142 | 44128954 | A/G | 0.1899 | 2.16 × 10−6 | 6.75 × 10−3 |
SZ/BD | hsa-mir-206 | Intergenic | 6 | 52144349-52144434 | rs6921008 | 52610560 | C/T | 0.2274 | 1.88 × 10−4 | 8.46 × 10−2 |
SZ/BD | hsa-mir-124-1 | Intergenic | 8 | 9903388-9903472 | rs7461939 | 9714111 | A/G | 0.4407 | 1.07 × 10−3 | 2.90 × 10−2 |
SZ | hsa-mir-1251 | Intergenic | 12 | 97491909-97491978 | rs4762481 | 98310417 | A/G | 0.3349 | 3.64 × 10−4 | 7.28 × 10−2 |
SZ | hsa-mir-494 | Intergenic | 14 | 101029634-101029714 | rs9324038 | 101408012 | A/G | 0.2015 | 2.55 × 10−4 | 7.53 × 10−3 |
SZ | hsa-mir-138-2 | Intergenic | 16 | 56858518-56858601 | rs1566439 | 56990750 | A/G | 0.3806 | 3.38 × 10−3 | 8.45 × 10−2 |
SZ/BD | hsa-mir-328 | Intergenic | 16 | 67202321-67202395 | rs28171 | 66537518 | A/G | 0.0519 | 2.92 × 10−4 | 7.00 × 10−2 |
SZ/BD | hsa-mir-132-3p | Intergenic | 17 | 2049908-2050008 | rs17834974 | 2742577 | A/G | 0.2726 | 7.07 × 10−4 | 8.84 × 10−2 |
SZ | hsa-mir-9-1 | Intragenic | 1 | 156420341-156420429 | rs4661040 | 156399474 | A/G | 0.2849 | 8.28 × 10−4 | 2.24 × 10−2 |
SZ/BD | hsa-mir-205 | Intragenic | 1 | 209432133-209432242 | rs11577858 | 209404159 | A/G | 0.3478 | 5.34 × 10−4 | 6.68 × 10−2 |
SZ | hsa-mir-664 | Intragenic | 1 | 220200538-220200619 | rs6669360 | 219474597 | A/T | 0.3636 | 1.71 × 10−3 | 5.98 × 10−2 |
SZ | hsa-mir-153 | Intragenic | 2 | 219294111-219294200 | rs1425029 | 219729817 | A/G | 0.3736 | 1.43 × 10−3 | 5.01 × 10−2 |
SZ | hsa-mir-217 | Intragenic | 2 | 55982967-55983076 | rs7604029 | 56042395 | C/T | 0.3231 | 7.96 × 10−4 | 7.16 × 10−2 |
SZ | hsa-miR-135a | Intragenic | 3 | 52294219-52294308 | rs3733047 | 52837913 | A/G | 0.2452 | 1.68 × 10−6 | 1.88 × 10−3 |
SZ | hsa-mir-218-1-3p | Intragenic | 4 | 20528275-20528384 | rs4389575 | 21020885 | A/G | 0.4599 | 6.22 × 10−4 | 1.04 × 10−2 |
SZ | hsa-mir-874 | Intragenic | 5 | 137647572-137647649 | rs10060914 | 137497671 | A/G | 0.3766 | 1.74 × 10−4 | 1.56 × 10−2 |
SZ | hsa-mir-103-1 | Intragenic | 5 | 168560896-168560973 | rs1422021 | 169357195 | A/G | 0.2107 | 4.38 × 10−4 | 6.58 × 10−2 |
SZ | hsa-mir-449a | Intragenic | 5 | 55170532-55170622 | rs35930 | 54285894 | A/G | 0.2752 | 6.76 × 10−4 | 1.01 × 10−2 |
SZ | hsa-mir-597 | Intragenic | 8 | 9741672-9741768 | rs735449 | 9245937 | G/T | 0.2388 | 8.24 × 10−4 | 2.88 × 10−2 |
SZ/BD | hsa-mir-32 | Intragenic | 9 | 109046229-109046298 | rs10114192 | 108859784 | C/T | 0.497 | 1.69 × 10−2 | 1.18 × 10−2 |
SZ | hsa-mir-601 | Intragenic | 9 | 123402525-123402603 | rs10739620 | 122840801 | C/G | 0.1378 | 2.12 × 10−4 | 7.42 × 10−3 |
SZ | hsa-mir-101 | Intragenic | 9 | 4850297-4850375 | rs10974788 | 4795595 | G/T | 0.1819 | 1.69 × 10−4 | 1.18 × 10−2 |
SZ | hsa-mir-7-1-3p | Intragenic | 9 | 83969748-83969857 | rs1502683 | 82984665 | C/T | 0.4323 | 2.69 × 10−3 | 9.42 × 10−2 |
SZ/BD | hsa-mir-27b | Intragenic | 9 | 95085445-95085541 | rs10993280 | 94647489 | C/T | 0.4782 | 6.25 × 10−4 | 9.21 × 10−2 |
SZ/BD | hsa-mir-148b | Intragenic | 12 | 54337216-54337314 | rs2306851 | 54854422 | C/T | 0.1372 | 7.33 × 10−3 | 9.53 × 10−2 |
SZ/BD | hsa-mir-16-1-3p | Intragenic | 13 | 50048973-50049061 | rs7338471 | 49406928 | G/T | 0.3548 | 1.16 × 10−4 | 3.09 × 10−2 |
SZ | hsa-mir-19b-1-3p | Intragenic | 13 | 91351192-91351278 | rs4773657 | 91963767 | C/T | 0.4692 | 4.37 × 10−4 | 5.37 × 10−2 |
SZ/BD | hsa-mir-190a | Intragenic | 15 | 62823957-62824041 | rs12438131 | 63465635 | C/G | 0.4998 | 5.55 × 10−3 | 1.39 × 10−2 |
SZ | hsa-mir-484 | Intragenic | 16 | 15643294-15643372 | rs6498573 | 15785516 | C/T | 0.2236 | 3.08 × 10−3 | 8.33 × 10−2 |
SZ | hsa-mir-744 | Intragenic | 17 | 12081899-12081996 | rs1468501 | 12018627 | C/T | 0.1965 | 1.19 × 10−3 | 1.07 × 10−2 |
SZ | hsa-mir-195 | Intragenic | 17 | 7017615-7017701 | rs11655246 | 6124519 | C/T | 0.345 | 3.65 × 10−5 | 1.61 × 10−2 |
eQTL, Expression quantitative trait loci; miRNA, microRNA; MAF, minor allele frequency; SZ, schizophrenia; BD, bipolar disorder.