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. 2016 Apr 26;11(4):e0145391. doi: 10.1371/journal.pone.0145391

Table 1. NoV recombinant sequences detected in Southern Brazil during the period of 2004–2011, with the partial 3’-ORF1 and 5’-ORF2 of NoV genome.

Year Sample identification Accession number Acute gastroenteritis outbreak date(month/year) NoV Genotyping Bootscan p-value
ORF1 ORF2
2004 LVCA-7842 KR074148 12/2004 GII.P7 GII.6 6.027 x 10−4
LVCA-9732 KR074149 09/2004 GII.P7 GII.14 3.610 x 10−4
LVCA-9752 KR074150 09/2004 GII.P7 GII.6 9.343 x 10−3
2005 LVCA-11125 KR074151 08/2005 GII.Pe GII.17 4.141 x 10−5
LVCA-11178 KR074152 09/2005 GII.Pe GII.17 6.426 x 10−5
2006 LVCA-11938 KR074153 03/2006 GII.P13 GII.17 8.085 x 10−9
2007 LVCA-14441 KR074158 10/2007 GII.P7 GII.6 7.127 x 10−4
2008 LVCA-14941 KR074170 04/2008 GII.P7 GII.6 8.509 x 10−4
LVCA-15040 KR074177 04/2008 GII.P7 GII.6 2.093 x 10−5
LVCA-15073 KR074159 04/2008 GII.P21 GII.3 8.195 x 10−7
LVCA-15109 KR074160 05/2008 GII.P7 GII.6 2.807 x 10−4
LVCA-15934 KR074178 11/2008 GII.P7 GII.6 5.513 x 10−5
2009 LVCA-16138 KR074161 01/2009 GII.Pg GII.12 1.680 x 10−4
LVCA-16253 KR074162 03/2009 GII.Pg GII.12 1.255 x 10−4
LVCA-16344 KR074191 04/2009 GII.Pg GII.12 8.017 x 10−5
LVCA-16345 KR074185 04/2009 GII.Pg GII.12 3.012 x 10−4
2010 LVCA-17775 KR074172 03/2010 GII.P7 GII.6 5.943 x 10−4
LVCA-17819 KR074173 03/2010 GII.P7 GII.6 1.242 x 10−4
LVCA-18916 KR074174 09/2010 GII.P21 GII.13 7.077 x 10−11
LVCA-19085 KR074179 11/2010 GII.P16 GII.3 8.609 x 10−11
2011 LVCA-19355 KR074181 01/2011 GII.P16 GII.3 4.847 x 10−10
LVCA-19502 KR074163 01/2011 GII.P16 GII.3 7.580 x 10−11
LVCA-19703 KR074164 03/2011 GII.P16 GII.3 8.050 x 10−10