Table 5.
Top 15 tissue-specific ASM sites, defined by highly variable ASM scores across cerebellum, whole blood, and cortex (BA9).
| Rank | SNP ID | Location | Associated gene (s) | Cerebellum ASM score | Blood ASM score | BA9 ASM score | SD |
|---|---|---|---|---|---|---|---|
| 1 | SNP_A-4255628 (rs959246) | 18q12.3 | SLC14A2, SETBP1 | −0.30 | −0.03 | −0.05 | 0.15 |
| 2 | SNP_A-1946136 (rs927000) | 20q13.12 | STK4 | −0.04 | 0.23 | 0.01 | 0.15 |
| 3 | SNP_A-8438077 (rs585451) | 15q21.2 | ATP8B4, DTWD1 | 0.01 | −0.25 | 0.00 | 0.15 |
| 4 | SNP_A-8397727 (rs1123514) | 5q13.3 | ENC1, RGNEF | −0.16 | 0.11 | −0.01 | 0.13 |
| 5 | SNP_A-2273834 (rs2252267) | 14q23.1 | PRKCH | 0.19 | −0.03 | −0.05 | 0.13 |
| 6 | SNP_A-4264458 (rs1358229) | 4q27 | TRPC3, KIAA1109 | −0.23 | 0.01 | 0.00 | 0.13 |
| 7 | SNP_A-8643616 (rs11700515) | 21q22.3 | COL6A1, PCBP3 | 0.20 | −0.01 | −0.03 | 0.13 |
| 8 | SNP_A-2180729 (rs10276966) | 7p15.2 | HIBADH, EVX1b | −0.01 | −0.25 | −0.03 | 0.13 |
| 9 | SNP_A-4210659 (rs10517764) | 4q32.2 | NAF1, FSTL5 | 0.07 | −0.14 | −0.15 | 0.13 |
| 10 | SNP_A-1997061 (rs10512149) | 9q21.33 | SLC28A3, NTRK2 | −0.19 | 0.02 | 0.05 | 0.13 |
| 11 | SNP_A-2160121 (rs7205794) | 16q23.3 | CDH13, MPHOSPH6 | −0.24 | −0.01 | −0.01 | 0.13 |
| 12 | SNP_A-8667432 (rs519782) | 1p36.11 | C1orf201 | 0.19 | −0.04 | −0.01 | 0.13 |
| 13 | SNP_A-1787058 (rs10951911) | 7p12.3 | TNS3, C7orf65 | −0.20 | −0.01 | 0.04 | 0.13 |
| 14 | SNP_A-1931666 (rs6707698) | 2q34 | IKZF2, ERBB4 | −0.22 | −0.03 | 0.02 | 0.13 |
| 15 | SNP_A-8502638 (rs10989120) | 9q31.1 | TMEFF1, C9orf30 | 0.04 | −0.20 | −0.15 | 0.13 |
b
Suspected imprinted gene