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. 2016 Apr 27;7:598. doi: 10.3389/fmicb.2016.00598

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Copyright © 2016 Hamilton, Bovee, Sattin, Mohr, Gilhooly, Lyons, Pearson and Macalady.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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The genetic potential for carbon, nitrogen, and sulfur cycling at 8 m and in the sediments of Mahoney Lake. The genetic potential for each step was estimated using a combination of normalized marker gene ratios as previously described (Lauro et al., 2011). The marker genes for dissimilatory sulfate reduction and sulfide oxidation (K00394, K00395, K00396) can operate in both sulfide oxidation and sulfate reduction. Therefore, they were assigned to sulfate reduction or sulfur oxidation based on the best match within KEGG. Sed, sediments. Marker genes are provided in Table S4.