Table 4.
Good models in set 2 candidates.
Ligand | Model ID | H-bond and Salt bridges Interactions | Distances between corresponding atom pairs (Å) |
---|---|---|---|
PS | gp7_D0145 | Head - R29 | 2.94 |
P - R66 | 2.91 | ||
Tail - R66 | 2.92 | ||
gp7_D0430 | Head - R29 | 2.79 | |
P - R29 | 2.74 | ||
P - R66 | 2.85, 2.85 | ||
Tail - K59 | 2.90 | ||
gp8_D0131 | Head - R66 | 2.86, 2.94 | |
P - 29 | 2.83 | ||
gp1_F0153 | Head - R29 | 2.83, 2.88 | |
P - R66 | 2.93 | ||
gp9_F0363 | Head - R29 | 2.61 | |
P - R66 | 2.96, 3.08 | ||
Tail - R66 | 2.60 | ||
PE | gp1_F0391 | Head - E36 | 2.84 |
P - R29 | 2.89 | ||
gp9_F0228 | Head - E36 | 2.95 | |
P - R29 | 2.90 |
Head is the ligand head group. P is the ligand phosphate moiety. Tail includes the ligand glycerol moiety and two fatty acid chains.