Table 2. Quality of 8 Calycopis genomes.
| Specimen (NVG-) | 3306 | 3307 | 3515 | 3348 | 3431 | 3978 | 4166 | 3033 |
|---|---|---|---|---|---|---|---|---|
| Coverage | 78* | 14.1 | 12.6 | 16.5 | 14.5 | 14.1 | 13.0 | 13.0 |
| Mapped noncoding region (%) | 100.0 | 88.7 | 88.2 | 84.4 | 84.2 | 83.1 | 83.2 | 82.5 |
| Mapped coding region (%) | 99.9 | 97.6 | 97.7 | 97.8 | 97.7 | 97.4 | 97.4 | 96.0 |
| 100% covered genes | 15729 | 12950 | 12640 | 12278 | 12040 | 11504 | 11642 | 8113 |
| 90% covered genes | 16446 | 15133 | 14958 | 14965 | 14876 | 14705 | 14717 | 13848 |
| 50% covered genes | 16456 | 16109 | 16109 | 16130 | 16109 | 16089 | 16076 | 16062 |
| Heterozygosity (%) | 1.16 | 1.46 | 1.44 | 1.79 | 1.83 | 1.58 | 1.59 | 1.96 |
| Heterozygosity (%) coding | 0.56 | 0.64 | 0.65 | 0.82 | 0.84 | 0.71 | 0.71 | 1.04 |
*This is the coverage for paired-end libraries. The mate pair libraries for the reference assembly were prepared using DNA from both specimens 3306 and 3307.