Table 3.
No. | miRNA Family | cel | dme | ccr | dre | ipu | xtr | gga | mmu | hsa | ccr Read |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | miR-let_7 | 1 | 1 | 5 | 18 | 21 | 9 | 11 | 12 | 12 | 185,356 |
2 | miR-8 | 1 | 1 | 3 | 6 | 6 | 3 | 3 | 5 | 5 | 41,287 |
3 | miR-1 | 1 | 1 | 2 | 4 | 3 | 4 | 4 | 4 | 3 | 943 |
4 | miR-34 | 1 | 1 | 1 | 3 | 2 | 5 | 3 | 3 | 3 | 305 |
5 | miR-9 | 1 | 4 | 1 | 7 | 7 | 4 | 2 | 3 | 3 | 77 |
6 | miR-124 | 1 | 1 | 2 | 6 | 5 | 1 | 4 | 3 | 3 | 12 |
7 | miR-2 | 1 | 8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
8 | miR-63 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
9 | miR-392 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
10 | miR-10 | 0 | 4 | 7 | 15 | 15 | 8 | 5 | 8 | 8 | 313,126 |
11 | miR-25 | 0 | 2 | 3 | 4 | 4 | 5 | 1 | 4 | 4 | 49,817 |
12 | miR-7 | 0 | 1 | 2 | 4 | 6 | 3 | 4 | 3 | 3 | 5689 |
13 | miR-375 | 0 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1846 |
14 | miR-29 | 0 | 1 | 2 | 3 | 3 | 4 | 4 | 4 | 4 | 1215 |
15 | miR-184 | 0 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 743 |
16 | miR-133 | 0 | 1 | 2 | 4 | 3 | 4 | 4 | 3 | 3 | 98 |
17 | miR-190 | 0 | 1 | 1 | 2 | 2 | 1 | 1 | 2 | 2 | 13 |
18 | miR-210 | 0 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 455 |
19 | miR-193 | 0 | 1 | 1 | 3 | 0 | 1 | 2 | 2 | 2 | 21 |
20 | miR-33 | 0 | 1 | 0 | 0 | 0 | 2 | 1 | 1 | 2 | 0 |
21 | miR-314 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
22 | miR-31 | 0 | 2 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 0 |
23 | miR-263 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
24 | miR-219 | 0 | 1 | 0 | 3 | 3 | 1 | 2 | 3 | 3 | 0 |
25 | miR-216 | 0 | 1 | 0 | 2 | 2 | 1 | 3 | 2 | 2 | 0 |
The abbreviation of the animal names used for miRNA nomenclature: Worm (Caenorhabditis elegans, cel); Fly (Drosophila melanogaster, dme); Common carp (Cyprinus carpio, ccr); Zebrafish (Danio rerio, dre); Channel catfish (Ictalurus punctatus, ipu); Frog (Xenopus tropicalis, xtr); Mouse (Mus musculus, mmu); Chicken (Gallus gallus, gga); Human (Homo sapiens, hsa); ccr read represents mRNA read count in the liver of the common carp control sample. The miRNAs in bold represent high abundant expression ones.