Table 9. Moran's I for each binary category (e.g. LTS vs. non-LTS).
All genes | Observed | Expected | Std | p value |
---|---|---|---|---|
LGG vs GBM | 0.3951 | -0.0026 | 0.0060 | 0 |
LTS vs nLTS | 0.0027 | -0.0036 | 0.0068 | 0.3513 |
normal vs tumor | -0.0030 | -0.0026 | 0.0005 | 0.4193 |
ULR genes | ||||
LGG vs GBM | 0.3373 | -0.0026 | 0.0059 | 0 |
LTS vs nLTS | 0.0033 | -0.0036 | 0.0071 | 0.3356 |
normal vs tumor | -0.0033 | -0.0026 | 0.0005 | 0.2393 |
LLR genes | ||||
LGG vs GBM | 0.3412 | -0.0026 | 0.0066 | 0 |
LTS vs nLTS | 0.0014 | -0.0036 | 0.0086 | 0.5612 |
normal vs tumor | -0.0033 | -0.0026 | 0.0005 | 0.2495 |
The statistics are computed over the coordinates of the first two principal components of DNA methylation.