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. 2016 Mar;13(1):12–18. doi: 10.28092/j.issn.2095-3941.2016.0003

Table1.

Examples of commercially available cancer panels

Company Panel name Number of genes Coverage Note
Life sciences Ion ampliSeq hotspot cancer panel 50 None indicated Compatible with FFPE sample
Life sciences Ion ampliSeq comprehensive cancer panel 409 None indicated Detect CNV; compatible with FFPE sample
Illumina TruSight cancer panel 94 20× Germline only
Illumina TruSight tumor 15 panel 15 ≥500× Solid tumor somatic variants
Illumina TruSight amplicon cancer panel 48 ~1000× Somatic mutational hotspots
Illumina TruSight RNA pan-cancer panel 21,043 exonic region 3 million reads per sample Gene expression, variant and fusion detection in 1,385 cancer associated genes
IDT xGen® pan-cancer panel 127 >97% of targeted covered at 30× Can be expanded by adding custom probes