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. 2016 Feb 26;291(18):9785–9795. doi: 10.1074/jbc.M115.696591

TABLE 3.

Summary of hydrodynamic properties of DAPDC enzymes

DAPDC Oligomer Theoretical molecular massa s20,w Experimental molecular massb f/f0c KD2→1d
kDa S kDa nm
B. anthracis Dimer 98 5.6 83 1.3 NDe
E. coli Monomer 47 4.2 52 1.1 ND
Dimer 94 5.5 81 1.4
M. tuberculosis Monomer 50 3.7 50 1.3 ND
Dimer 100 5.4 86 1.4
V. cholerae Dimer 98 5.6 92 1.3 ND
V. cholerae labeled (Abs) Dimer 100 5.8 98 1.3 ND
V. cholerae Monomer 50 3.6 41 1.3 0.06
labeled (FDS) Dimer 100 5.6 91 1.3
N381A Monomer 49 3.6 46 1.2 17.3
Dimer 98 5.1 76 1.4
R385A Monomer 49 3.7 51 1.2 410
dimer 98 5.2 77 1.4

a Molecular masses derived from amino acid sequence.

b Molecular masses obtained from the ordinate maximum of peaks in the c(M) distribution.

c Frictional ratio derived using the bar method (24).

d Determined from global nonlinear best fit to a monomer-dimer equilibrium model using sedimentation equilibrium data at multiple concentrations and rotor speeds.

e ND, not determined.