Table 1.
Genes regulated by CSF2 in inner cell mass after adjustment for a false discovery rate of 2 %
| Gene symbol or description | Mean counts, control | Mean counts, CSF2 | Fold change, CSF2/control | Adjusted P value |
|---|---|---|---|---|
| Upregulated | ||||
| FRMPD3 | 1.4 | 21.3 | 14.71 | 0.045 |
| NDNF | 1.7 | 22.8 | 13.29 | 0.019 |
| LAPTM5 | 43.3 | 531.8 | 12.28 | 0.000 |
| Olfactory receptor 4A47 (LOC100294956) | 4.4 | 37.2 | 8.48 | 0.014 |
| CYP3A5 | 37.3 | 230.9 | 6.20 | 0.000 |
| Serine incorporator 1 pseudogene (LOC781002) | 25.2 | 152.2 | 6.05 | 0.000 |
| TMEM182 | 17.8 | 83.6 | 4.69 | 0.014 |
| CSN3 | 97.6 | 444.2 | 4.55 | 0.000 |
| Downregulated | ||||
| MYADM-like (ENSBTAG00000001526) | 10.2 | 0 | – | 0.006 |
| CD68 | 1156.8 | 491.9 | 0.43 | 0.024 |
| CFAP54 | 162.4 | 69.2 | 0.43 | 0.026 |
| DAG1 | 345.6 | 141.4 | 0.41 | 0.026 |
| HSD3B1 | 183.6 | 71.7 | 0.39 | 0.002 |
| EKC/KEOPS complex subunit LAGE3 (LOC618023) | 87.4 | 29.9 | 0.34 | 0.019 |
| SEMA4G | 127.1 | 42.5 | 0.33 | 0.026 |
| BAG3 | 835.4 | 204.9 | 0.25 | 0.028 |
| PAQR7 | 187.9 | 31.5 | 0.17 | 0.013 |
| PAH | 56.2 | 8.8 | 0.16 | 0.012 |
| MUC3A | 79.6 | 12.4 | 0.16 | 0.014 |
| SOX30 | 85.3 | 12.6 | 0.15 | 0.013 |
| HSPA6 | 240.0 | 29.3 | 0.12 | 0.000 |
| SYNE2 | 635.1 | 76.7 | 0.12 | 0.000 |
| OR5T2 | 88.6 | 10.1 | 0.11 | 0.000 |
| Olfactory receptor, family 5, subfamily T-like (ENSBTAG00000039348) | 11.7 | 0.6 | 0.05 | 0.046 |
| CMYA5 | 38.5 | 2.0 | 0.05 | 0.006 |