Table 4.
Resistance genes, sequence types and plasmid replicons of the sequenced isolates
| Isolate | Beta-Lactam genes | Other antibiotic resistance genes | Plasmid replicon type | pMLST | Sequence type | Phylogenetic group |
|---|---|---|---|---|---|---|
| RA005 | a bla CTX-M-15, bla OXA-1, bla TEM-1B | aadA5, aac(6’)Ib-cr, aac(3)-IIa | IncFIA, IncFIB, IncFII | F1:A1:B1 | ST-648 | D |
| RA023 | a bla CTX-M-15 | aadA5, qnrS1 | IncY | - | ST-4450 | A |
| RA025 | a bla CTX-M-15 | aadA5, qnrS1 | IncY | - | ST-4450 | A |
| RA034 | a bla CTX-M-15, bla OXA-1, bla TEM-1B | aadA5, aac(6’)Ib-cr, aac(3)-IIa | IncFIA, IncFIB, IncFII | F1:A1:B1 | ST-648 | D |
| RA043 | bla CTX-M-15 , bla TEM-1B | strB, strA, qnrS1 | IncY | - | ST-2852 | B1 |
| RA045 | a bla CTX-M-15, bla OXA-1 bla TEM-1B | aadA5, aac(6’)Ib-cr, aac(3)-IIa | IncFIA, IncFIB, IncFII | F1:A1:B1 | ST-648 | D |
| RA051 | bla CTX-M-15, bla OXA-1, bla TEM-1B | aadA5,aac(6’)Ib-cr, aac(3)-IIa, strA, strB | IncFIA, IncFIB, IncFII | F31:A4:B1 | ST-617 | A |
| RA061 | a bla CTX-M-15, bla OXA-1 | aadA1, aac(6’)Ib-cr, aac(3)-IIa,strA, strB | IncFIB, IncFII | F1:A-:B33 | ST-38 | D |
| RA073 | a bla CTX-M-15, bla OXA-1 | aadA5, aac(6’)Ib-cr, aac(3)-IIa,strA, strB | IncFIA, IncFIB, IncFII | F1:A1:B16 | ST-131 | B2 |
| RA085 | bla CTX-M-15, bla TEM-1B | strB, strA, qnrS1 | IncFIA, IncFIB, IncFII, IncY | F1:A1:B20 | ST-2852 | B1 |
| RA102 | a bla CTX-M-15, bla OXA-1 | aadA1, aac(6’)Ib-cr, aac(3)-IIa, strA, strB | IncFIB, IncFII | F1:A-:B33 | ST-38 | D |
| RA105 | bla CTX-M-15, bla OXA-1, bla TEM-1B | aadA5, aac(6’)Ib-cr, aac(3)-IId, strA,strB | IncFIA, IncFIB, IncFII | F87:A4:B1 | ST-617 | A |
| RA116 | a bla CTX-M-15, bla OXA-1 | aadA5, aac(6’)Ib-cr,aac(3)-IIa,strA, strB, | IncFIB, IncFIA, IncQ1, IncFII | F1:A1:B16 | ST-131 | B2 |
| RA134 | a bla CTX-M-15 | aadA1, strA, strB | No replicon | ST-205 | B1 | |
| RA166 | bla CTX-M-15, bla OXA-1 | aadA5, aac(6’)Ib-cr, aac(3)-IIa, | IncFIA, IncFIB, | F31:A4:B1 | ST-131 | B2 |
| RA173 | a bla CTX-M-15, bla OXA-1, bla TEM-1B | aadA5, aac(6’)Ib-cr, aac(3)-IId, strA,strB | IncFIB, IncFIA, IncQ1, IncFII | F48:A1:B26 | ST-131 | B2 |
| RA175 | a bla CTX-M-15, bla OXA-1, bla TEM-1B | aadA5, aac(6’)Ib-cr, aac(3)-IId, strA, strB | IncFIA, IncFIB, IncQ1, IncFII | F48:A1:B26 | ST-131 | B2 |
| RA176 | bla CTX-M-15, bla TEM-1B | strB, strA,qnrS1 | IncY | - | ST-38 | D |
| RA194 | bla CTX-M-15, bla OXA-1, bla TEM-1B | aadA5,aac(6’)Ib-cr, aac(3)-IIa, strA, strB | IncFIA, IncFIB, IncFII | F31:A4:B1 | ST-617 | A |
| RA195 | bla CTX-M-15, bla TEM-1B | aadA1, aac(3)-IId, strB, strA | IncFIB, IncFII | F1:A-:B33 | ST-38 | D |
| RA217 | bla CTX-M-15, bla OXA-1 | aadA5, aac(6’)Ib-cr,aac(3)-IIa, strA, strB | IncFIA, IncFIB, IncFII | F31:A4:B1 | ST-44 | A |
| RA218 | bla CTX-M-15, bla OXA-1 | aadA5, aac(6’)Ib-cr,aac(3)-IIa, strA, strB | IncFIB, IncFIA, IncFII | F31:A4:B1 | ST-44 | A |
| RA228 | a bla CTX-M-15, bla OXA-1 | aadA1, aac(6’)Ib-cr, aac(3)-IIa,,strA, strB | IncFIB, IncFII | F1:A-:B33 | ST-38 | D |
| RA246 | bla CTX-M-15, bla OXA-1, bla TEM-1B | aadA5, aac(6’)Ib-cr, aac(3)-IIa, strA,strB | IncFIA, IncFII | F2:A1:B- | ST-131 | B2 |
| RA256 | bla CTX-M-15, bla TEM-1B | strB, strA,qnrS1 | IncY, IncFIB | F46:A-:B24 | ST-2852 | B1 |
ain these isolates CTX-M-15 was located in the chromosome