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Hantavirus prevalence and phylogeography in Rattus rattus from Mayotte island. Prevalence and intra-strain variability of MAYOV hantavirus according to localization of the captured R. rattus. Phylogenetic analysis was done using partial S segment sequences (nt 13–1017). Anjozorobe virus, previously detected in Madagascar (GenBank accession no. KC490916) was used as an outgroup. Bar, mean number of nucleotide substitutions per site. Colour codes correspond between the map and the tree.
