Table 3. Trends of evolution of lineages over time, and distribution of lineages vs. studied parameters.
Lineage | 2000–2003 (%) | 2004–2007 (%) | 2008–2010 (%) | Mean Age (standard deviation) [Min;Max] | Male/Female Sex ratio | Pulmonary (%) | Extra-pulmonary (%) | Pan-susceptible | Drug resistant | MDR |
---|---|---|---|---|---|---|---|---|---|---|
AFRI | 11 (2.67) | 16 (1.79) | 9 (0.95) | 32.61 yrs. (12.63) [5;61] | 19/17 = 1.12 | 19 (2.19) | 8 (2.17) | 20 (2.14) | 5 (3.01) | 0 (0.00) |
Beijing | 10 (2.43) | 41 (4.58) | 33 (3.48) | 38.40 yrs. (17.64) [8;88] | 58/25 = 2.32 | 48 (5.53) | 6 (1.63) | 37 (3.95) | 6 (3.61) | 8 (47.06) |
BOV | 9 (2.18) | 41 (4.58) | 45 (4.74) | 44.91 yrs. (28.06) [1;94] | 46/49 = 0.94 | 13 (1.50) | 46 (12.47) | 4(0.43) | 28 (16.87) | 0 (0.00) |
Cameroon* | 12 (2.91) | 19 (2.12) | 22 (2.32) | 32.87 yrs. (14.61) [6;74] | 26/26 = 1.00 | 23 (2.65) | 8 (2.17) | 25 (2.67) | 3 (1.81) | 0 (0.00) |
CAS | 5 (1.21) | 9 (1.00) | 16 (1.69) | 35.43 yrs. (18.08) [10;95] | 18/12 = 1.50 | 9 (1.04) | 7 (1.90) | 12 (1.28) | 2 (1.20) | 1 (5.88) |
EAI | 12 (2.91) | 23 (2.57) | 31 (3.27) | 47.24 yrs. (18.66) [19;85] | 40/26 = 1.54 | 33 (3.80) | 11 (2.98) | 41 (4.38) | 1 (0.60) | 0 (0.00) |
H/Ural | 96 (23.30) | 202 (22.54) | 216 (22.76) | 54.30 yrs. (22.07) [2;109] | 284/230 = 1.23 | 195 (22.47) | 83 (22.49) | 214 (22.86) | 39 (23.49) | 1 (5.88) |
LAM | 61 (14.81) | 150 (16.74) | 149 (15.70) | 49.65 yrs. (21.84) [1;94] | 222/138 = 1.61 | 135 (15.55) | 65 (17.62) | 160 (17.09) | 27 (16.27) | 3 (17.65) |
S | 18 (4.37) | 22 (2.46) | 23 (2.42) | 52.89 yrs. (21.31) [1;91] | 26/37 = 0.70 | 29 (3.34) | 9 (2.44) | 28 (2.99) | 3 (1.81) | 2 (11.76) |
T | 148 (35.92) | 300 (33.48) | 314 (33.09) | 56.90 yrs. (23.72) [1;101] | 456/304 = 1.50 | 299 (34.45) | 92 (24.93) | 309 (33.01) | 47 (28.31) | 2 (11.76) |
Turkey** | 0 (0.00) | 4 (0.45) | 3 (0.32) | 34.29 yrs. (21.13) [19;66] | 2/5 = 0.40 | 5 (0.58) | 0 (0.00) | 4 (0.43) | 0 (0.00) | 0 (0.00) |
Unknown | 30 (7.28) | 65 (7.25) | 83 (8.75) | 54.68 yrs. (23.85) [1;95] | 102/76 = 1.34 | 58 (6.68) | 32 (8.67) | 78 (8.33) | 5 (3.01) | 0 (0.00) |
X | 0 (0.00) | 4 (0.45) | 5 (0.53) | 51.0 yrs. (23.40) [19;79] | 6/3 = 2.00 | 2 (0.23) | 2 (0.54) | 4 (0.43) | 0 (0.00) | 0 (0.00) |
* The Cameroon lineage was previously labeled LAM10-CAM in the database.
** The Turkey lineage was previously labeled LAM7-TUR in the database.