Table 2. Classification and abundance of coding sequences of putative housekeeping function extracted from the sialotranscriptome of R. neglectus.
Subclass | No. of CDS | No. of reads | % Total |
---|---|---|---|
Unknown conserved | 805 | 1,219,305 | 14.65 |
Protein export | 271 | 1,151,192 | 13.84 |
Protein synthesis machinery | 287 | 779,314 | 9.37 |
Signal transduction | 604 | 725,961 | 8.73 |
Protein modification | 153 | 595,681 | 7.16 |
Transcription machinery | 468 | 566,268 | 6.81 |
Lipid metabolism | 217 | 477,020 | 5.73 |
Nucleotide metabolism | 87 | 426,894 | 5.13 |
Cytoskeletal protein | 190 | 297,617 | 3.58 |
Transporter and Channel | 272 | 293,911 | 3.53 |
Protein modification, protease | 91 | 244,360 | 2.94 |
Carbohydrate metabolism | 150 | 230,497 | 2.77 |
Immunity | 78 | 177,405 | 2.13 |
Extracellular matrix | 92 | 175,813 | 2.11 |
proteasome | 191 | 157,781 | 1.90 |
Energy metabolism | 166 | 143,638 | 1.73 |
Amino acid metabolism | 79 | 127,157 | 1.53 |
Nuclear Export | 26 | 120,662 | 1.45 |
Nuclear Regulation | 218 | 116,946 | 1.41 |
Transcription factor | 100 | 99,589 | 1.20 |
Detoxification | 93 | 77,717 | 0.93 |
Storage | 15 | 56,888 | 0.68 |
Intermediary metabolism | 57 | 30,227 | 0.36 |
Signal Transduction, apoptosis | 28 | 28,548 | 0.34 |
Total | 4739 | 8,320,391 | 100 |