Table 3. Software predicted candidate Dlk1-Dio3 mat miRNA target genes.
Ontology Predicted Targets | |
---|---|
miR-127 | TGF-ßR1 |
miR-136 | CD28, Fas-L, PI3K |
miR-376c | CXCL1, 5, 16, IFNa6, IL-1RAP, IL-2, PDGFRa, ß, PI3K, Smad4, Smurf1, TGF-ßR1, TNFSF4 |
miR-379 | AMPK, Bcl-2, Collagen IV, HGF, IGF1, IGF1R, PDGF, PG-F2R, PTEN, Smad4, Smurf1, SREBP1, TGF-ßR1 |
miR-409-3p | AMPK, Collagen IV, IGF1, IL-2, PKC, Smad2,4, TGF-ßR1, 2 |
miR-411 | AMPK, Bcl-2, GSK3b, HGF, IGF1, IGF1R, IL-1a, MMP-7, PDGF, PTEN, Smad4, Smurf1 |
miR-495 | AMPK Bcl-2, Caspase 8, CD8b, Collagen IV, FAS, GSK3B, Hexokinase2, HGF, IGF1, IGFR1,IL-1ß, IL-1R, IL-6, IRS1,2, JAK3, LDL-R, Leptin, Leptin R, MMP-14, PDGFa, PDGFRa, PI3K, PKC, PPARa, PTEN, Smad2, 4, Smurf1, TGF-ß1, TGF-ßR1, R2 |
The boldface genes are frequently predicted as targets for more than four of these seven miRNAs. The standard nomenclature for each of the abbreviations used in this table is listed in S3 Table.