Skip to main content
. 2016 May 2;12(5):e1005992. doi: 10.1371/journal.pgen.1005992

Table 1. The candidate COGs interacting with circadian enhancers via invariant cohesin-mediated loops.

Gene Symbol Circadian Phase (CT) Transcription Factor Transcription Factor binding site position (kb) Cohesin KO-CN Log2-Fold-Change (LFC)
Tmtc2 11 Bmal1 200 -2.5
Rnf43 7.5 Bmal1 39 -1.5
Phldb2 7 Bmal1 126 -1.1
Cdo1 6 Bmal1 -130, -121 -1.2
Kcnb1 11 Bmal1 -128 -1
Atr 11 Bmal1 -317,-315,-305 -1.4
1200009I06Rik 23.5 Nr1d1 -30 -0.8
Ahnak 20.5 Nr1d1 106, 108, 131 -0.9
Dapk1 23.5 Nr1d1 -121, -116, 129, 135 -1.2
Npas2 1 Nr1d1 -179, -169 -1.1