Table 1.
Value | Columbia Series | Iowa Series | Amsterdam Series | Rotterdam Series | Germany Series | Iceland Series | AREDS Series | Australia Series | Total | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Patients with Geographic Atrophy |
Controls | Patients with Geographic Atrophy |
Controls | Patients with Geographic Atrophy |
Controls | Patients with Geographic Atrophy |
Controls | Patients with Geographic Atrophy |
Controls | Patients with Geographic Atrophy |
Controls | Patients with Geographic Atrophy |
Controls | Patients with Geographic Atrophy |
Controls | Patients with Geographic Atrophy |
Controls | |
Total no. of subjects | 211 | 365 | 102 | 295 | 89 | 264 | 64 | 843 | 184 | 366 | 210 | 169 | 163 | 204 | 57 | 163 | 1080 | 2669 |
Genotype (no. of subjects) | ||||||||||||||||||
CC | 105 | 204 | 53 | 152 | 41 | 136 | 28 | 422 | 105 | 191 | 102 | 90 | 82 | 101 | 30 | 70 | 546 | 1366 |
CT | 93 | 133 | 37 | 108 | 40 | 103 | 29 | 341 | 63 | 139 | 96 | 65 | 71 | 82 | 21 | 76 | 450 | 1047 |
TT | 13 | 28 | 12 | 35 | 8 | 25 | 7 | 80 | 16 | 36 | 12 | 14 | 10 | 21 | 6 | 17 | 84 | 256 |
Minor-allele (T allele) frequency | 0.28 | 0.26 | 0.30 | 0.30 | 0.31 | 0.29 | 0.33 | 0.30 | 0.26 | 0.29 | 0.29 | 0.28 | 0.28 | 0.30 | 0.29 | 0.33 | 0.29 | 0.29 |
P value | ||||||||||||||||||
Hardy–Weinberg equilibrium | 0.54 | 0.58 | 0.36 | 0.09 | 0.89 | 0.67 | 1.00 | 0.63 | 0.33 | 0.33 | 0.24 | 0.93 | 0.56 | 0.80 | 0.82 | 0.82 | ||
For difference in
allele frequency |
0.44 | 0.94 | 0.53 | 0.36 | 0.29 | 0.75 | 0.46 | 0.35 | 0.59 | |||||||||
Odds ratio (95% CI)† | 1.12 (0.86–1.47) | 0.99 (0.70–1.40) | 1.12 (0.78–1.63) | 1.20 (0.82–1.75) | 0.86 (0.65–1.14) | 1.05 (0.77–1.45) | 0.89 (0.64–1.22) | 0.8 (0.5–1.27) | 1.03 (0.92–1.15) |
AREDS denotes Age-Related Eye Disease Study, and CI confidence interval.
Odds ratios are for the frequency of the TLR3 variant in the geographic atrophy group as compared with the control group.