Table 2.
Samples of herring used for whole genome resequencing.
Localitya | Sample | n | Position | Salinity (‰) | Date (yy/mm/dd) |
Spawning season |
|
---|---|---|---|---|---|---|---|
Baltic Sea | |||||||
Gulf of Bothnia (Kalix)b | BK | 47 | N 65°52’ | E 22°43’ | 3 | 800629 | spring |
Bothnian Sea (Hudiksvall) | BU | 100 | N 61°45’ | E 17°30’ | 6 | 120419 | spring |
Bothnian Sea (Gävle) | BÄV | 100 | N 60°43’ | E 17°18’ | 6 | 120507 | spring |
Bothnian Sea (Gävle) | BÄS | 100 | N 60°43’ | E 17°18’ | 6 | 120718 | summer |
Bothnian Sea (Gävle) | BÄH | 100 | N 60°44’ | E 17°35’ | 6 | 120904 | autumn |
Bothnian Sea (Hästskär)c | BH | 50 | N 60°35’ | E 17°48’ | 6 | 130522 | spring |
Central Baltic Sea (Vaxholm)b | BV | 50 | N 59°26’ | E 18°18’ | 6 | 790827 | spring |
Central Baltic Sea (Gamleby)b | BG | 49 | N 57°50’ | E 16°27’ | 7 | 790820 | spring |
Central Baltic Sea (Kalmar) | BR | 100 | N 57°39’ | E 17°07’ | 7 | 120509 | spring |
Central Baltic Sea (Karlskrona) | BA | 100 | N 56°10’ | E 15°33’ | 7 | 120530 | spring |
Central Baltic Sea | BC | 100 | N 55°24’ | E 15°51’ | 8 | 111018 | unknown |
Southern Baltic Sea (Fehmarn)b | BF | 50 | N 54°50’ | E 11°30’ | 12 | 790923 | autumn |
Kattegat, Skagerrak, North Sea, Atlantic Ocean | |||||||
Kattegat (Träslövsläge)b | KT | 50 | N 57°03’ | E 12°11’ | 20 | 781023 | unknown |
Kattegat (Björköfjorden) | KB | 100 | N 57°43’ | E 11°42’ | 23 | 120312 | spring |
Skagerrak (Brofjorden) | SB | 100 | N 58°19’ | E 11°21’ | 25 | 120320 | spring |
Skagerrak (Hamburgsund)b | SH | 49 | N 58°30’ | E 11°13’ | 25 | 790319 | spring |
North Seab | NS | 49 | N 58°06’ | E 06°10’ | 35 | 790805 | autumn |
Atlantic Ocean (Bergen)b | AB1 | 49 | N 64°52’ | E 10°15’ | 35 | 800207 | spring |
Atlantic Ocean (Bergen)c | AB2 | 8 | N 60°35’ | E 05°00’ | 33 | 130522 | spring |
Atlantic Ocean (Höfn) | AI | 100 | N 65°49’ | W 12°58’ | 35 | 110915 | spring |
Pacific Ocean | |||||||
Strait of Georgia (Vancouver) | PH | 50 | - | - | 35 | 121124 | - |
aPlaces where the sample was landed (if known) are given in parenthesis.
bSamples from previous study (Lamichhaney et al., 2012).
cEight Baltic herring from the BH sample and eight Atlantic herring from the AB2 sample were used for individual sequencing n=number of fish.