Table 1.
Protein | Gene ID | Description | hfAIM1 | xLIR2 | PSSM3 |
---|---|---|---|---|---|
AtPEX1 | AT5G08470 | Peroxisomal AAA-ATPases | EDDWEVL* (1, 2, 4, 5) | DDWEVL* | 26 (1.2e-03) |
ND | STYVDV | 12 (1.1e-01) | |||
RLGWEDV* (3) | LGWEDV* | 16 (3.0e-02) | |||
FDEFDSI* (1, 5) | DEFDSI* | 15 (4.2e-02) | |||
AtPEX6 | AT1G03000 | Peroxisomal AAA-ATPases | VIFFDEL (3) | ND | 5 (1.0e+00) |
AtPEX10 | AT2G26350 | ZN RING proteins | ND | GVFLLI | 6 (7.4e-01) |
GEEYCDI (1) | ND | 9 (2.8e-01) | |||
AtPex3-2 | AT1G48635 | Peroxisome membrane assembly | LQLWDEL (3) | ND | 14 (5.7e-02) |
AtPex5 | AT5G56290 | Peroxisome targeting sequence binding | GAAWDEV (3) | ND | 15 (4.2e-02) |
ND | PMFEPV | 10 (2.0e-01) | |||
AtPex7 | AT1G29260 | Peroxisome targeting sequence binding | AHDFEIL (5) | ND | 14 (5.7e-02) |
STGWDEL (3) | ND | 18 (1.6e-02) | |||
AtPex14 | AT5G62810 | Peroxisome docking | RKYFEDL (3) | ND | 7 (5.3e-01) |
AtPex17 | AT4G18197 | Peroxisome docking | ND | PSFTTL | 11 (1.5e-01) |
SGEWETL* (5) | GEWETL* | 20 (8.4e-03) | |||
AtPex19-1 | AT3G03490 | Peroxisome membrane assembly | LKQFEDL (3) | ND | 9 (2.8e-01) |
AtPEX2 | AT1G79810 | ZN RING proteins | ND | ND | – |
AtPEX3-1 | AT3G18160 | Peroxisome membrane assembly | ND | ND | – |
AtPex4 | AT5G25760 | Peroxisome matrix protein import | ND | ND | – |
AtPEX11A | AT1G47750 | Peroxisome division-proliferation | ND | ND | – |
AtPEX11B | AT3G47430 | Peroxisome division-proliferation | ND | ND | – |
AtPEX11C | AT1G01820 | Peroxisome division-proliferation | ND | STFLFL | 12 (1.1e-01) |
AtPEX11D | AT2G45740 | Peroxisome division-proliferation | ND | STFLFL | 12 (1.1e-01) |
AtPEX11E | AT3G61070 | Peroxisome division-proliferation | ND | STFLFL | 12 (1.1e-01) |
AtPEX12 | AT3G04460 | ZN RING proteins | ND | FTYQLL | 12 (1.1e-01) |
AtPEX13 | AT3G07560 | Peroxisome docking | ND | ND | – |
AtPEX16 | AT2G45690 | Peroxisome membrane assembly | ND | ND | – |
AtPex19-2 | AT5G17550 | Peroxisome membrane assembly | ND | ND | – |
AtPEX22 | AT3G21865 | Peroxisome matrix protein import | ND | ND | – |
hfAIM, high fidelity AIM prediction. The numbers in brackets correspond to the hfAIM patterns indicated in Figure 2A.
xLIR was predicted by iLIR online website.
PSSM values were derived from the iLIR system.
stars indicate that the AIMs were predicted by both hfAIM and iLIR; ND, no AIMs predicted by either hfAIM or iLIR.