Table 4.
Top 10 DE genes downregulated and upregulated in CHC/C comparison
| Accession Number | Gene Name | Gene description | Fold Change |
|---|---|---|---|
| Top ten down-regulated DE genes in CHC/C list | |||
| NM_001031347 | CIRBP | Cold inducible RNA binding protein | 0.48 |
| XM_419942 | CPSF3 | Similar to Cleavage and Polyadenylation Specifity Factor protein | 0.57 |
| NM_001031044 | DUSP10 | Dual specificity phosphatase 10 (DUSP10), mRNA [NM_001031044] | 0.61 |
| XM_414105 | SIAH1 | E3 Ubiquitin Protein Ligase 1 | 0.61 |
| XM_419574 | C1orf96 | Chromosome 1 open reading frame 96 | 0.64 |
| XM_001232892 | DUSP8 | Dual specificity phosphatase 8 | 0.66 |
| NM_001031197 | SRSF5 | Serine/arginine-rich splicing factor 5 | 0.66 |
| XM_003642723 | DYRK3 | Dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3, transcript variant 1 | 0.66 |
| XM_417975 | DYRK3 | Dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3, transcript variant 2 | 0.66 |
| XM_003642238 | RNF39 | Zinc finger protein RFP-like | 0.67 |
| Top ten up-regulated DE genes CHC/C list | |||
| XM_001233913 | FAM188B2-like | Family 188 B2-like transcript | 5.21 |
| NM_001199909 | PDK4 | Pyruvate dehydrogenase kinase, isozyme 4 | 2.06 |
| NM_001031810 | B-G | MHC B-G antigen | 1.95 |
| NM_205021 | COL12A1 | Collagen, type XII, alpha 1 | 1.75 |
| XM_418238 | COMP | Cartilage oligomeric matrix protein | 1.70 |
| NM_001109785 | HSP90AA1 | Heat shock protein 90 kDa alpha class A member 1 | 1.69 |
| NM_205456 | TNC | Tenascin C | 1.60 |
| NM_205291 | SERPINH1 | Serpin peptidase inhibitor, clade, member 1 | 1.54 |
| NM_001012576 | HSPA4L | Heat shock 70 kDa Protein 4-Like | 1.52 |
| NM_204289 | HSP90B1 | Heat shock Protein 90 kDa beta member 1 | 1.48 |