Table 7.
Apple down-regulated pathways by infection with P. expansum
| Pathway name | p value (adjusted) |
|---|---|
| Glycogen biosynthesis I (from ADP-D-Glucose) | 9.064E-08 |
| Starch biosynthesis | 6.194E-07 |
| C4 Photosynthetic carbon assimilation cycle | 0.0002403 |
| UDP-galactose biosynthesis (salvage pathway from galactose using UDP-glucose) | 0.0008945 |
| Lipoate biosynthesis and incorporation I | 0.0019429 |
| Methylerythritol phosphate pathway | 0.0031538 |
| Acyl carrier protein metabolism | 0.0034133 |
| Trans-lycopene biosynthesis | 0.0059809 |
| Fatty acid biosynthesis initiation I | 0.0070497 |
| Pyridoxal 5'-phosphate biosynthesis | 0.0087438 |
| Superpathway of pyridoxal 5'-phosphate biosynthesis and salvage | 0.0132283 |
| Xylitol degradation | 0.0161255 |
| Starch degradation | 0.0173149 |
| Heme biosynthesis I | 0.0178181 |
| Heme biosynthesis from uroporphyrinogen I | 0.0195451 |
| Colanic acid building blocks biosynthesis | 0.0199615 |
| Xylose degradation I | 0.0284483 |
| Sucrose biosynthesis | 0.0303525 |
| 5-Aminoimidazole ribonucleotide biosynthesis II | 0.0332884 |
| Biotin-carboxyl carrier protein | 0.0357646 |
| Methanol oxidation to formaldehyde | 0.0437164 |
The analysis was performed with MetGenMap