Table 2.
Top 5 differential methylated positions (DMPs) in combined, girls and boys analysis
| Probe | p | Adj. p | Delta | Gene | Region |
|---|---|---|---|---|---|
| Combined | |||||
| cg07687119 | 6.4E−06 | 0.942 | 0.009 | HOXC4/5/6 | 5UTR/body/body |
| cg01599189 | 1.1E−05 | 0.942 | 0.020 | NBPF1 | 5′UTR |
| cg09789536 | 2.8E−05 | 0.942 | 0.020 | KLHL17 | Body |
| cg11433629 | 2.9E−05 | 0.942 | −0.012 | IGR | NA |
| cg23339709 | 2.9E−05 | 0.942 | 0.009 | OR8U8/OR5M8 | Body/exon1 |
| Girls | |||||
| cg23876832a | 1.7E−07 | 0.081 | 0.214 | IGR | NA |
| cg13181291 | 1.8E−06 | 0.427 | −0.016 | GABPB2 | Body |
| cg13700939 | 1.3E−05 | 0.999 | 0.065 | IGR | NA |
| cg09573389 | 1.3E−05 | 0.999 | 0.039 | C10orf58 | TSS1500 |
| cg24691332 | 3.0E−05 | 0.999 | 0.024 | PARD3 | Body |
| Boys | |||||
| cg06644124 | 1.6E−06 | 0.773 | 0.034 | ZNF281 | 1stExon/5UTR |
| cg11126313 | 1.2E−05 | 0.997 | 0.009 | CCR3 | 5UTR |
| cg09357684 | 1.4E−05 | 0.997 | 0.064 | THAP3 | TSS1500 |
| cg09175834 | 1.5E−05 | 0.997 | 0.018 | NAV3 | 1stExon |
| cg21255128 | 2.1E−05 | 0.997 | 0.018 | C7orf50 | Body |
p p value, adj. p adjusted p value (BH), Delta expressed as β difference, IGR inter genic region, 5′-UTR 5′ untranslated region, Body genebody, TSS1500 transcription start site 1500 bp upstream
aHigh frequency (CEU MAF > 0.05) SNP located at position 34 of probe. Adjusted p values <0.05 were assumed significant