Table 4. The least-squares regressions of frequencies of individuals bearing a specified network or SNP vs. latitude for the populations indicated in Table 1 from the frequency and sample size data given in Table 4.
Network/SNP | Genes | Intercept | Slope | Quadratic Term | R2 |
---|---|---|---|---|---|
65_1 | TYRP1, TYR, VDR | 0.752 | –0.0074** | n.s. | 0.70 |
70_1 | TYRP1 | 0.977 | –0.0082*** | n.s. | 0.76 |
rs1042602 | TYR | 0.890 | 0.0065* | n.s. | 0.56 |
70_5 | VDR | 0.848 | n.s. | –0.0002* | 0.53 |
70_5–Af | VDR | 0.920 | –0.0027** | n.s. | 0.68 |
65_2 | VDR, MC1R, SLC24A5, SLC45A2 | −0.066 | 0.0200*** | n.s. | 0.84 |
70_4 | VDR | 0.608 | 0.0104* | –0.0007* | 0.73 |
70_4–Af | VDR | 0.858 | n.s. | n.s. | 0.15 |
rs4073729 | VDR | 0.858 | n.s. | –0.0002* | 0.50 |
rs4073729–Af | VDR | 0.942 | –0.0023* | n.s. | 0.61 |
rs2228478 | MC1R | 0.741 | 0.0066** | –0.0005** | 0.85 |
rs2228478–Af | MC1R | 0.877 | n.s. | n.s. | 0.21 |
rs3212369 | MC1R | 0.575 | 0.0063** | n.s. | 0.59 |
rs1426654 | SLC24A5 | 0.579 | 0.0130** | –0.0007* | 0.80 |
rs1426654–Af | SLC24A5 | 0.810 | n.s. | n.s. | 0.24 |
rs16891982 | SLC45A2 | −0.136 | 0.0209*** | n.s. | 0.86 |
65_3 | MC1R | 0.363 | 0.0125*** | –0.0005** | 0.91 |
65_3–Af | MC1R | 0.511 | 0.0064** | n.s. | 0.69 |
65_4 | VDR | 0.983 | n.s. | n.s. | 0.29 |
65_5 | VDR | 0.462 | n.s. | n.s. | 0.36 |
65_6 | VDR | 0.671 | n.s. | n.s. | 0.00 |
65_7 | MC1R | 0.728 | n.s. | n.s. | 0.06 |
Significant with P ≤ 0.05, ** significant with P ≤ 0.01, *** significant with P ≤ 0.001. SNP, single nucleotide polymorphism; n.s., not significant; –Af, the sub-Saharan African populations were excluded from the regression analysis.