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. 2016 Feb 26;6(5):1251–1266. doi: 10.1534/g3.115.026773

Table 4. The least-squares regressions of frequencies of individuals bearing a specified network or SNP vs. latitude for the populations indicated in Table 1 from the frequency and sample size data given in Table 4.

Network/SNP Genes Intercept Slope Quadratic Term R2
65_1 TYRP1, TYR, VDR 0.752 –0.0074** n.s. 0.70
70_1 TYRP1 0.977 –0.0082*** n.s. 0.76
rs1042602 TYR 0.890 0.0065* n.s. 0.56
70_5 VDR 0.848 n.s. –0.0002* 0.53
70_5–Af VDR 0.920 –0.0027** n.s. 0.68
65_2 VDR, MC1R, SLC24A5, SLC45A2 −0.066 0.0200*** n.s. 0.84
70_4 VDR 0.608 0.0104* –0.0007* 0.73
70_4–Af VDR 0.858 n.s. n.s. 0.15
rs4073729 VDR 0.858 n.s. –0.0002* 0.50
rs4073729–Af VDR 0.942 –0.0023* n.s. 0.61
rs2228478 MC1R 0.741 0.0066** –0.0005** 0.85
rs2228478–Af MC1R 0.877 n.s. n.s. 0.21
rs3212369 MC1R 0.575 0.0063** n.s. 0.59
rs1426654 SLC24A5 0.579 0.0130** –0.0007* 0.80
rs1426654–Af SLC24A5 0.810 n.s. n.s. 0.24
rs16891982 SLC45A2 −0.136 0.0209*** n.s. 0.86
65_3 MC1R 0.363 0.0125*** –0.0005** 0.91
65_3–Af MC1R 0.511 0.0064** n.s. 0.69
65_4 VDR 0.983 n.s. n.s. 0.29
65_5 VDR 0.462 n.s. n.s. 0.36
65_6 VDR 0.671 n.s. n.s. 0.00
65_7 MC1R 0.728 n.s. n.s. 0.06
*

Significant with P ≤ 0.05, ** significant with P ≤ 0.01, *** significant with P ≤ 0.001. SNP, single nucleotide polymorphism; n.s., not significant; –Af, the sub-Saharan African populations were excluded from the regression analysis.